ACR122U smart card reader not recognized after reboot...

I am new to POS Windows and have been working with wondows for ever. I was using ACR 122u contactless usb smart card reader with windows XP and communicating with it using java with no problems. Then our I changed the OS to windows Pos ready 2009 and we found out that USB card reader has to be unplugged and plugged back in after rebooting the computer. other than the OS everything else is identicle (driver, reader, java program, ect..). Can any one tell me what could cause this problem and what I can do to solve this.
I have cheked the device manager and under USB controllers it says that it is unrecognized deivice..I tried changing the reader, changing the port and(actually the reader is pluged in to a linksys external usb hub, but changing this to a internal port did not make any difference) tried chagning some settings in control panel.
1. I checked the power option of the root usb hub.
2. Changed the driver.cab to a normal driver.cab obtained from the normal xp version. Uninstall the driver and reinstall it.
So far this hasnt been working.
I hope someone could help me with this.
~Tharanga

After extensive tests with Win 7 Embedded and ACR122U, I can confirm the same problem. It seems that reader firmware hangs and the only way to recover is to unplug and plug again the reader. We shall repeat the tests with readers from other manufacturers.
For the tests, we use a Win7 Embedded Standard PC with an ACR122U connected. We installed and configured the ACS Monitor program to start automatically with windows. We made a small utility to restart the PC every minute and we placed it on the Startup directory.
Within the first 5-10 reboots, the reader fails and the ACS monitor program shows " No reader connected" and no reaction from the reader. If we shall unplug and plug the reader again to the USB port everything works fine again.
Kostas P.

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After doing some research on the message, I came across this post.
I guess your PC has a smart card optional system.
http://h30499.www3.hp.com/t5/Business-PCs-Compaq-Elite-Pro/DC7800-smart-card-athentication/m-p/10691...
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http://bizsupport1.austin.hp.com/bc/docs/support/SupportManual/c01162201/c01162201.pdf
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