BOXI sever unavailable after Java SDK install

I recently installed the Java SDK on a platform running BOXI 3.1 SP3. During the install, I de-selected the Enterprise options (per the install doc). Subsequent to the install, I no longer had access to the BOXI. Upon review, it seems that the custom install removed the exec files for all of the client programs, along with the exec for SIA, CMC.url, InfoView.url, and Tomcat.
However, with the exception of the above files and service, the installation directory in intact, along with the File Store and CMSC. What is the recommended procedure to restore the missing elements? I figure I'll have to initiatie the custom install to recapture Tomcat, but what about the exec files? Will a custom install add only the missing elements, or re-install the entire server? Thanks in advance for you help.
Mark

The instructions you followed were likely for installing on a new machine, not for an existing install.  The items that are selected are what will be installed after you run the installation, so removing options I believe will remove those from the installation.  It may be best to ask this in the architecture forum [here|Business Intelligence Solution Architecture; or to create a case with support.

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