Bridge CS4 won't output to pdf multiple images with same filename

Hiya...my googling efforts have thus far failed!
I've got CS4, and in Bridge, I created a New Smart Collection to find all filenames in a folder containing "." or ".jpg" - which in turn searched through all the subfolders like what you used to be able to do in Photoshop CS3. Very simple stuff, but all the images are jpg's, but in multiple folders (I don't want to move them out of the folders, as the files came from an external source, and there are heaps of folders, and I don't want to pdf each subfolder seperately as it will take forever).
The problem is that some of the files have the same filenames (again I'd prefer not to rename, as it happens a lot on this project, and they are all over the place). So whilst Bridge will show the thumbnail images correctly in the content tabbed screen in my New Smart Collection, but once I've done the Output to PDF thing, for example, instead of showing both different images it has pdf only the first image but repeated it twice. And this happens multiple times throughout the pdf, the more times the same filename is used, the more times the first image gets repeated.
I know that it is messy to have multiple similar filenames, but why can't bridge just place the image anyway? It allocated a space for it on the pdf and does show it in bridge, it just doesn't seem to survive the transfer to pdf well.
The only other thing that I have done is use the below link (which was posted on another adobe forum thread) to create a custom pdf output template (nothing too fancy, just number of rows / columns, size, font etc). But I've tried using the standard bridge templates and it does the same thing.
http://www.proficiografik.com/2009/08/03/save-custom-pdf-output-template-in-adobe-bridge-c s4.html
Any help would be appreciated...even if to tell me that I am being unreasonable!
UPDATE 16/11/09
Just to let you know that I seem to have resolved the bug inadvertently with one of the Adobe updates. The below is the link for the AdobeOutputModule-2.1-mul-AdobeUpdate.zip which was released on 2/19/2009 - which allows for headers & footers to be placed in the Ouput pdf. I finally installed it today, and everything seems to be working fine now (i.e. I can pdf multiple images with the same filenames and the pdf will actually show each different image rather than repeating only 1 of the images).
Must have been a fix installed in the contact sheet templates that get installed with the update - not sure why the original version was corrupted, but I've left that with the Adobe guys (I submitted a bug report - and they were able to replicate the problem but hadn't fixed it as yet).
http://www.adobe.com/support/downloads/detail.jsp?ftpID=4228
Message was edited by: djtun71 (16/11/09)

When I click import from disc I am asked to choose a disc and then I get this message:
The following photos will not be imported because they are already present in the catalog. To see these photos in the catalog select 'Show in Library' (the import will be canceled).
This is followed by a long list of images. If I click 'Show in Library' I can see all the images with the same filename. And then they start to automatically write over those images with images from the disc. However they keep the same metadata and keywords from the previous images. If I click on Import and deselect the "don't reimport suspected duplicates" box, it imports only the images that don't share filenames and none of the images that do.
Is there a way of setting the "Don't reimport suspected duplicates" box in preferences?

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