Cloned startup disk question

This past June I cloned my startup hard drive, the original 320GB HDD that came with my Mac Pro new in March 2008. I used Disk Utility's Restore and erased the new drive first, selecting Mac OS Extended, Journaled. This drive, a WD 1TB Caviar Black, is recognized when I boot from another drive because it shows up as a choice using System Preferences > Startup Disk.
The question I have is that a second, more recent 1TB drive, a Hitachi 1TB drive, was sent through the same process. My Mac Pro will start up fine using this drive, but when I look at System Preferences > Startup Disk, this newly-cloned drive is not an option. The first cloned drive that I mentioned above is showing, and a second option shows, Network Startup. Why does the Hitachi drive I cloned a couple of days ago not show up in System Preferences > Startup Disk even though my system is booted from this drive?
The drives were cloned using an eSata dock, and no errors were reported during the 2 to 3 hour process.

Since I see no way to edit this question, I am adding some more info.
When I restart my Mac and hold down the option key, both cloned drives (mentioned above) are shown as options for startup - the Hitachi and the WD drives, both clones of the original 320GB drive. Also, a third option is Windows. Since I chose the Hitachi drive as my startup drive, the Mount Point shows it is the primary drive.
When I select System Preferences > Startup Disk, the Hitachi drive still does not show up as an option.
One more observation is that when I used About This Mac > More Info, this Hitachi drive has
Partition Map Type:          MBR (Master Boot Record)
even though I selected Mac OS Extended (Journaled) when I erased the new drive.
All the other drives (four of them) show
Partition Map Type:          GPT (GUID Partition Table)
Do I need to re-format the drive to ensure it is partitioned as GPT?
Message was edited by: Leon Smith

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