External Hard Drive with Time Machine, Will it Delete Files that aren't Backups?

Hello reader,
          My concern right now that I need help with is backing up with Time Machine. I went down to an Apple Store and they formated my External Drive 1TB to work with Time Machine then I backed up my MacBook Pro and all is well. However, now I want to do this again, BUT now I have added files onto the external drive that are newer but I didn't want to do a complete backup for. Like new pictures or iMovie events. So instead of redoing a complete backup after adding like 3 big files and nothing else, I just tossed them on the Extrernal Drive no problem. Now I feel like it's been a while and I should do a full backup for all the littler files I have now. But there is now 1 "Backup" File on the external drive that "Can't be modified" or I would have just dragged the 3 quick large files into the backup that I made and been happy. But I couldn't do that so I put it in some blank space on the external drive.
But my question for you, reader, is if I backup again, will the files that ARE NOT in the backup folder that was created from an ACTUAL backup from Time Machine be deleted?
                                                                                                                                                                                                                                 Backup Files from First Backup                      These 2 are things I added                                                                                                                                                                                             that I didn't feel I had to waste                                                                                                                                                                                     another 100GB on unchanged                                                                                                                                                                          things with another complete backup.

TimeMachine is designed to perform one full backup when it is first connected to your computer and from then on back up only the files you add or edit. Opening the TimeMachine drive's backup folder from the Finder is basically a no-no. Access TimeMachine via the TimeMachine application.
Assuming you frequently plug the TimeMachine drive in and let it backup and assuming the newer files are on the computer - they are being backed up and TimeMachine will be able to restore the entire drive if/when it is needed.
Just keep these things in mind. TimeMachine runs every hour (when it is connected to your computer - so be sure to connect it at least once a day and let it do a backup) and backs up new and edited files. It is guaranteed to keep any file that is currently on your computer. If you delete a file from your computer TimeMachine may delete it if extra space is needed. The drive you use for TimeMachine really shouldn't be used for any other purpose.

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