Fusion drive and backup/restore issues

Hi,
since I installed a fusion drive on my early 2008 iMac, consisting of an internal 256GB SSD and an (external FW800) 320GB hard disk, I occassionally run into trouble when system updates are pending. In the past, at worst the time machine backup couldn't be restored and I had to reformat and reinstall the system from scratch - which is not really comfortable!
Currently, running Mountain Lion, when I try to select the startup disk, it complains that Boot-Caches on the Boot-Helper-Partition cannot be created. Nevertheless the system starts fine (and runs fast ;-).
Before upgrading to Mavericks, I would like to know
     - if someone else ran into similar problems with fusion drives, when updating/upgrading system software.
     - Is it normal that a Time Machine backup cannot be (completely) restore a Fusion drive?
Yes, I know that having the harddisk part of a fusion drive externally is not recommended/supported by Apple - and my Mac is nearly 6 years old, but that would not explain why system updates/restores nearly always fail and sometimes the Time Machine backup drive has a broken file system (needed reformatting)! And I always checked the disks with Disk Utility prior to updating...
Any comments are appreciated.

You can file feedback here. The more who file the more the faster the issues may be fixed.
Also you shoud look on the CCC forums.

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