How can I migrate data from old macs second harddrive in time machine backup to my new mac?

Hi,
I have a little problem migrating all my data from my old Macbook to my new Macbook. I had two harddisk installed in my Macbook and did make a backup to a USB Disk. It seems that both harddisk are included in the backup. I can see them in Time Machine.
Now I want to restore my data to the new Macbook Retina. Unfortunately the Migration Assistant only shows the system disk, but not the data disk.
How can I access the data disk in the backup to restore the data to some directory on the new Macbook? The data is mostly the iTunes Library of my old Macbook.
Regards

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HTH
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