How do I move PDF files out of iBooks and into Goodreader?

Question. How do I move my PDF files out of iBook and into Goodreader. ??

I may havE found why the files disappear in the first place.
In iTunes, after connecting your iPad, check on the sync list. Click the "books" tab and be sure that "Books and PDF files" is selected. Then go thru the list and be sure all the PDF files you want to save are checked.
Perhaps this wasn't done causing the PDF files to not be synced and thus restored during the conversion to iOS5.
Thanks for your help. I will stop worrying about it and in any case, I  now have several ways to recover those PDF files.

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