How to use .MKV and .ISO with Premiere Pro? They are not supported.

Hi all. My brother in-law sent us two .mkv videos and a DVD .iso he wants me to use in a video I am cutting for him. The only trouble is, I've no idea how to get them into a format PremPro can handle.
I've searched and the only solutions I have found are infinitely complicated for me. Avisynth is certainly beyond me.
Anyone know of a way to convert .mkv (info lists 942x720 H.264 4:2:0 YUV MPEG4 AVC) into something useable?
Same question for an ISO file.
Thanks much
By the way, this is not for anything 'important' nor am I getting paid, so I have no budget tp purchase software. I am sure there must be a free solution.
I tried this trial version software...
http://www.moyea.com/import-flv/
But it would NOT install. It just errored in a loop and was unable to find or understand I have CS5 PremPro.

Can anyone explain how to use VLC to transcode? The settings are endless and NONE look correct. Everything is about coverting and shrinking and that is not what I want.
I have looked into this so many times and cannot find how to do it. I know it must be simple, but clearly I am blind.
What I need is to take whatever is inside that stupid MKV wrapper and extract it. Transcode it. I have been trying for A YEAR now and have never been able to find a solution.
I'm on a PC and unfortunately, there are free solutions for a MAC. But that won't help me.
EDIT: One option I see is tsMuxer! But which setting for Output? I can choose...
TS muxing... or M2TS musing... or Blu-ray disk... or AVCHD disk... or DEMUX
To explain more, I have a Blu-Ray I purchased and want to add the audio from my laserdisc, since the remixed audio on the disc sucks (hard). I'll also add English subtitles. To be clear, this work is for ME for my own personal use.
Here is a screen grab from tsMuxer. Which to choose? I will place the audio and video in Premiere Pro. Sync the old Laserdisc audio up and then EXPORT to Adobe Encore to burn a new BD.

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