InDesign Transparency Effects - Problems with Image Quality and File Size

Hello,
We are experiencing new problems exporting InDesign files to PDF.
To summarize, though our largest workflow is to create files for offset printing, we also deliver our work to PDF for mounting on a website so our clients can download directly from the web. Our new problem is Transparency Effects, and creating a PDF that will both have a high quality (or resolution), and be a small file size.
We are working with multiple page documents (24 to 48 pages), and would very much like to work with InDesign Transparency Effects. However, after spending much time testing a variety of PDF types, we are finding there is a radical difference between quality and file size. I was curious if anyone has had these problems, and if there is a simple answer. InDesign is an incredible program that allows us to design on the fly with Transparency Effects, but, if we are going to experience these problems, we will have to eliminate these wonderful tools.
Can you help me or lead me to information online that will help.
Thank you,
Lain

Please don't post in multiple forums. Your question has nothing to do with the PDF language and specifications, but rather PDF workflow or InDesign. I've responded to your other posting and am closing this thread.
- Dov

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