Is there a way through aperture to move all of my referenced photos onto a new hard drive while maintaining the current file structure and still keep them as referenced files.

I just want to migrate all of my work (all photos are referenced) from one drive to another and have my aperture library start working off of my new larger hard drive.

Depending on how your folder hierarchy is organized you might be able to do this with file->relocate masters and one of the options of folder organization that is provided but... if you have complicated hierarchy that Aperture will not reproduce then you can just copy all the entire folder hierarchy to the new drive using finder and then use file->locate masters to reconnect them to Aperture like this...
Aperture 3 – Locate Referenced Files « RB|Design
It's actually a bit easier if the old folder hierarchy/drive is disconnected when you do this for a few reasons.
RB

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