Java Preferences not picking up changes

Ok .. well.. all of a sudden, Java Preferences isn't picking up the Java version that I've set.
I want to find out what stuff the Java Preferences app modifies so I can check and see what is going on with my system.
Yes, JAVA_HOME is not set, when I echo it, it returns an empty line.
I created a clean user account and yes it DOES work, so I need to find out what setting has caused my own account to be borked.
I checked my bash_profile, /etc/profile, /private/etc/bashrc, /private/etc/profile and all do not have JAVA_HOME anywhere.
Can anyone help? I've spent too long on this silly thing >.<

Since the issue is specific to your original user account, you can proceed in two ways. One is to log into your new account, make a list of the preference files (plists) located in /username/Library/Preferences/, including any in the ByHost subfolder, log back into the original account, move everything on that other account's list from the original account's Preferences folder into a newly created folder on the Desktop, log out and back in, and see if the problem goes away. If so, you can copy the ones in the Desktop folder (one at time) back into /Preferences/, restart, and see if the problem returns. If so, you've identified the corrupt/conflicting one. Continue with all of them until isolating the bad ones. That'll save you the trouble of resetting preferences.
The second way is much more detailed and I'll not burden you with the steps unless the above doesn't fix the issue.

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