Mail: search and smart mailboxes stopped working

Hi folks,
In mail the search and smart mailboxes have stopped working.  I have a hunch it's something to do with iCloud as my partner is now logged onto iCloud using iTunes etc. Can you help?

My accounts are POP. But I have managed to fix the problem. When you mentioned Spotlight, I went into System Preferences thinking I may had accidentally turn off emails as a search option in Spotlight. It was on, but I turned it OFF and then ON again, and now search works in mail as usual. And my Smart Mailboxes too.
It's one of those things
Thanks for your help

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