Multiple .flv files out of syc after first video

On a PC with W7, office 2010 and CP6.
When embedding multiple .flv files in CP6, and running the published html5 presentation off my local drive, only first .flv file is in sync after publishing in html5. The 2nd .flv video is out of sync.
I’m running CP6 on a PC with several information slides and one slide with an embedded .flv file. Then a few more information slides and a second slide with another embedded .flv file. Preview mode looks fine on both videos. The original mp4 videos that I imported into CP6 which it converted to .flv files works fine as well.
When I publish the file in html5 only, and launch the file off a local drive the first video runs fine but the second one is out of sync. Repeated publishing doesn’t help. I’ve inserted other videos and the same problem occurs on the second video. Also the control bars that I put below the .flv video don’t show up in hmtl5 published format.
Why is the second video out of sync. My goal is to have 4-5 short .flv embedded videos in the presentation with information slides preceding each video.
When I go to the published folder:
and click individually on the videos the first one runs fine, the second one is out of sync – same as when I launch the index.htm file off my local drive.
When I copy the files to my Mac, and run off the local drive I have the same problem.
Need some help here.

Could be the encoding. Never heard of that software.
You could possibly convert the files in iTunes by right clicking and choosing conversion for AppleTv option but that takes time and will only work for things iTunes can play natively. There may be better options but MPEGStreamclip is a versatile free video converter as I believe is the latest version of the Handbrake utility.

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