Please help suggestions for solving built-only compiler error: 'The VI is not executable. The full development version of LabView is required tofix this error.'

We have develoepd a software tool and build it on regular basis. It currently runs error free when compiled in the editor, but when we built it and run the executable stand alone we get the error.
'The VI is not executable. The full development version of LabView is required tofix this error.' plus a broeken error.
This menas an compiler error that is not present in the editor but in the stand alone version. We tried to identify errors as suggested in several posts in this forum, but so far unsuccesfull.
As the editor and its compiler do not see the error  and are running fine and the stand alone version just syas 'find the error in the editor' in this case LabView is of no help.
Can anyone suggest a sensible or 'good practice ' way of searching for the source of this error?
Our project  comprises hundreds of Vis over several libraries.
Thanks,
Chris

Thanks Craig for all your suggestions.
We seem to have located the problem in a new vi just added to the package causing conflicts by using the same vi names as other vis already present in the package. Excluding this vi removed the error.
It seems related to a conflict by having two vis with the same name, which was mentioned by LabView and interactively resolved when running the main vi from the editor. When successfully building the main vi the builder did not mention this conflict and reported a successful build, but when trying to run the executable it gave the cryptic error. The error caused us problems because there was no hint for the cause, just the suggestion to solve this in the editor, while at the same time in the editor the VI was running fine.
We will post about this in detail after we have positively proven that this actually was the case.
The .net version issue was already checked.
Performance was the same on all machines we tested on including the dev machine.
Debugging was tried nut did not help as the vi could not run (broken arrow). We assumed that debugging only helps in running faulty functioning vi''s. We did not check for broken arrows in sub-vis (after connecting), that could have helped, although our application has hundreds of our own vis.
In relation to your remark: 
'Are you using many classes? Have you verified that the proper access scopes are set for functions calling those vis?'
Could you elaborate on setting access scopes. We were not aware of this option in LabView, although we realize this is a basic element of the underlying c code.
Ragrds,
Chris

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