Records are missing in the File which XI has placed in Target FTP server

Hi All,
I have a scenario where in XI is transfering the files from ECC to Target System . No transformation required here . I am using AAE to run this scenario.
Issue i am facing here is that i can see few records missing in the File  which XI had placed in the Target system FTP server . Same file if i check it in archive folder of ECC (which XI has archived after picking the file), complete set of records are present for the same file.
Need your inputs please....
Note : XI is using AAE to transfer the files and no mapping . Also i tried to check out the audit logs in the channel monitoring . Unforutanely i was not able to see the logs to check the bytes that was transferred while readng and writing the file . Sometimes i have faced audit logs issue in PI 7.1
Regards
Vinay P.

Please use temporary name scheme
http://help.sap.com/saphelp_nwpi711/helpdata/en/44/6830e67f2a6d12e10000000a1553f6/content.htm
hope this helps
regards
Ninad

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