Some files missing

hey all, i have a 30gb ipod w/ movies and pics.. some somgs are in my itunes libary and can be played when clicking them, but they do not update into my ipod? why is this

Yes, it's weird that unplugging a drive with iTunes not running, then re-connecting, should cause a problem. However, those ! are not coming from the music files but from the iTunes Library database file which holds all the paths to each and every song. Pointing your Preferences to the Music Folder will only do part of the job - if something happened to that Library file, that's a separate issue.
I'm puzzled why your Preferences reverted to default. That shouldn't have happened.
Do you have a backup of your iTunes Library file somewhere? If so, copying that back to the iTunes folder may resolve this.

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