Strange glitch in my audio when exporting from FCPX.

I just finished my short film in FCPX today, and exported it. I used Apple's ProRes 422(HQ) format to export it using the "Export Using Compressor Settings" options. I was content with the video quality, however the audio was I believe to have been corrupted. I played my video in QuickTime X and on both my iMac and my MacBook Pro I can hear really annoying and distracting glitches that keep cutting up my audio and making the bass sound extremely weird. In the end, I put my video in iMovie, silenced out the audio and put on a track of the same song I was using in the original video. And just like I expected, the audio of the file that came out of iMovie did not have any of these weird glitches. Does anyone know what I might be doing wrong in FCPX that is casuing this problem or it might be something to do with the software itself? Perhaps bugs?

No, they are AAC audio files, 256kbps that I got from my iTuens library. So they need to be AIFF at 48k? Does the convert option to AIFF in iTunes satisfy this criteria? I am relatively new to audio formatting and related issues.

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    I have read other threads with similar comments (even the thread that mentioned "milky" results when exporting from FCP to AE and back) but none of the suggestions/remarks helped in my situation.
    I'm sure others have experienced this. Any suggestions?
    Settings:
    After Effects comp: NTSC/DV Preset (720 x 480, lower field, etc.)
    Export Codecs: DV/DVCPro-NTSC, Animation, Component (same milky results)
    Final Cut: Sequence Preset DV/NTSC 48 Khz
    Also tried using, as one thread suggested, the "Uncompressed 8 bit NTSC 48 Khz" preset and nothing better
    Side note: I'm using Final Cut in this system with both DV video and Betacam, using an Aja card. Both DV and Beta results look the same (going straight thru the decks-to-NTSC monitor).
    And yes, I've checked the NTSC monitor-- a Sony Trinitron PVM-20 monitor. And I've looked at the results on other monitors and even regular TVs. Milky faint video all around.
    Any suggestions would be appreciated!!

    You might want to post this in the FCP forum next door; this for Final Cut Express

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