System freezes after the 10.9.3 update

Hello
New MacBook Pro, 15", 2.3 GHz, 16GB RAM, 1TB SSD
After the update to 10.9.3, the system hangs several times a day. Sometimes the freeze continues for about a minute and then the machine gets back to normal, sometimes it does not - then only hard reboot solves it. Are there any similar experiences out there? Any idea for possible causes?
Thank you
Boris

And this is the system report - at it's "normal" state. Obviously I'll not be able to run the EntreCheck when the thing freezes...
EtreCheck version: 1.9.11 (43) - report generated May 22, 2014 at 4:59:05 PM GMT+3
Hardware Information:
          MacBook Pro (Retina, 15-inch, Late 2013)
          MacBook Pro - model: MacBookPro11,3
          1 2.3 GHz Intel Core i7 CPU: 4 cores
          16 GB RAM
Video Information:
          Intel Iris Pro - VRAM: (null)
          NVIDIA GeForce GT 750M - VRAM: 2048 MB
System Software:
          OS X 10.9.3 (13D65) - Uptime: 0 days 4:9:12
Disk Information:
          APPLE SSD SM1024F disk0 : (1 TB)
                    EFI (disk0s1) <not mounted>: 209.7 MB
                    Macintosh HD (disk0s2) / [Startup]: 899.7 GB (493.45 GB free)
                    Recovery HD (disk0s3) <not mounted>: 650 MB
                    Windows 7 Pro (disk0s4) /Volumes/Windows 7 Pro: 100 GB (22.99 GB free)
USB Information:
          Apple Internal Memory Card Reader
          Apple Inc. Apple Internal Keyboard / Trackpad
          Apple Inc. BRCM20702 Hub
                    Apple Inc. Bluetooth USB Host Controller
Thunderbolt Information:
          Apple Inc. thunderbolt_bus
Gatekeeper:
          Anywhere
Kernel Extensions:
          [kext loaded] com.Cycling74.driver.Soundflower (1.6.6 - SDK 10.6) Support
          [kext loaded] com.aladdin.kext.aksfridge (1.0.2) Support
          [kext loaded] com.avira.kext.FileAccessControl (1.0.0d1 - SDK 10.9) Support
          [not loaded] com.devguru.driver.SamsungACMControl (1.4.14 - SDK 10.6) Support
          [not loaded] com.devguru.driver.SamsungACMData (1.4.14 - SDK 10.6) Support
          [not loaded] com.devguru.driver.SamsungComposite (1.4.14 - SDK 10.6) Support
          [not loaded] com.devguru.driver.SamsungMTP (1.4.14 - SDK 10.5) Support
          [not loaded] com.devguru.driver.SamsungSerial (1.4.14 - SDK 10.6) Support
          [not loaded] com.driver.JRDMassStorageDriver64 (1.0.0) Support
          [not loaded] com.driver.JRDMassStorageDriverType05 (1.0.0) Support
          [not loaded] com.driver.JRDUSBModemData32 (1.0.1) Support
          [not loaded] com.driver.JRDUSBModemData64 (4.0.8) Support
          [not loaded] com.focusrite.driver.usb.audio (2.6) Support
          [not loaded] com.focusrite.driver.usb2audio (1.2) Support
          [not loaded] com.paceap.kext.pacesupport.leopard (5.8 - SDK 10.4) Support
          [not loaded] com.paceap.kext.pacesupport.master (5.8) Support
          [not loaded] com.paceap.kext.pacesupport.panther (5.8 - SDK 10.3) Support
          [kext loaded] com.paceap.kext.pacesupport.snowleopard (5.8 - SDK 10.6) Support
          [not loaded] com.paceap.kext.pacesupport.tiger (5.8 - SDK 10.4) Support
          [kext loaded] com.senstic.driver.PocketAudioDevice (1.2 - SDK 10.6) Support
          [kext loaded] com.senstic.driver.PocketCamDevice (1.0.0 - SDK 10.7) Support
          [not loaded] com.senstic.driver.PocketCamDevice.UserClient (1.0.0 - SDK 10.7) Support
          [not loaded] de.rme-audio.driver.RMEFirefaceUSB (1.94 - SDK 10.8) Support
          [kext loaded] org.virtualbox.kext.VBoxDrv (4.2.18) Support
          [not loaded] org.virtualbox.kext.VBoxNetAdp (4.2.18) Support
          [not loaded] org.virtualbox.kext.VBoxNetFlt (4.2.18) Support
          [kext loaded] org.virtualbox.kext.VBoxUSB (4.2.18) Support
Startup Items:
          PACESupport: Path: /Library/StartupItems/PACESupport
          VirtualBox: Path: /Library/StartupItems/VirtualBox
Problem System Launch Agents:
          [loaded] com.paragon.NTFS.trial.plist Support
          [loaded] com.paragon.NTFS.upd.plist Support
Launch Daemons:
          [loaded] com.adobe.fpsaud.plist Support
          [loaded] com.adobe.SwitchBoard.plist Support
          [running] com.aladdin.aksusbd.plist Support
          [running] com.aladdin.hasplmd.plist Support
          [failed] com.avira.antivirus.dbcleaner.plist Support
          [loaded] com.avira.antivirus.ipm.loader.plist Support
          [running] com.avira.helper.watchdox.plist Support
          [loaded] com.barebones.authd.plist Support
          [not loaded] com.barebones.textwrangler.plist Support
          [running] com.crashplan.engine.plist Support
          [loaded] com.google.keystone.daemon.plist Support
          [not loaded] com.gopro.stereomodestatus.plist Support
          [failed] com.micromat.TechToolProDaemon.plist Support
          [loaded] com.microsoft.office.licensing.helper.plist Support
          [loaded] com.oracle.java.Helper-Tool.plist Support
          [loaded] com.oracle.java.JavaUpdateHelper.plist Support
          [running] com.paceap.eden.licensed.plist Support
          [running] com.parallels.mobile.dispatcher.launchdaemon.plist Support
          [loaded] com.parallels.mobile.kextloader.launchdaemon.plist Support
          [loaded] com.prosofteng.DriveGenius.locum.plist Support
          [running] com.senstic.DPA.PocketCamAssistant.plist Support
          [loaded] com.senstic.PocketCam.DriverReloader.plist Support
          [not loaded] com.teamviewer.teamviewer_service.plist Support
          [not loaded] com.winzip.WinZip-Mac.plist Support
          [running] com.xrite.device.xrdd.plist Support
          [loaded] org.macosforge.xquartz.privileged_startx.plist Support
          [not loaded] org.macports.rsyncd.plist Support
          [loaded] PACESupport.plist Support
Launch Agents:
          [not loaded] com.adobe.AAM.Updater-1.0.plist Support
          [loaded] com.adobe.AdobeCreativeCloud.plist Support
          [loaded] com.adobe.CS5ServiceManager.plist Support
          [running] com.amazon.sendtokindle.launcher.plist Support
          [loaded] com.avira.antivirus.ipm.ui.plist Support
          [loaded] com.avira.antivirus.notifications.agent.plist Support
          [loaded] com.avira.antivirus.odscan.default.plist Support
          [loaded] com.avira.antivirus.scheduler.agent.plist Support
          [running] com.avira.antivirus.systray.plist Support
          [loaded] com.avira.antivirus.telemetry.agent.plist Support
          [loaded] com.avira.antivirus.update.default.plist Support
          [loaded] com.divx.dms.agent.plist Support
          [loaded] com.divx.update.agent.plist Support
          [loaded] com.google.keystone.agent.plist Support
          [failed] com.micromat.TechToolProAgent.plist Support
          [loaded] com.oracle.java.Java-Updater.plist Support
          [loaded] com.parallels.mobile.prl_deskctl_agent.launchagent.plist Support
          [loaded] com.parallels.mobile.startgui.launchagent.plist Support
          [not loaded] com.teamviewer.teamviewer.plist Support
          [not loaded] com.teamviewer.teamviewer_desktop.plist Support
          [loaded] com.xrite.device.softwareupdate.plist Support
          [running] de.rme-audio.RMEfirefaceUSBAgent.plist Support
          [loaded] org.macosforge.xquartz.startx.plist Support
User Launch Agents:
          [loaded] com.adobe.AAM.Updater-1.0.plist Support
          [loaded] com.adobe.ARM.[...].plist Support
          [loaded] com.adobe.ARM.[...].plist Support
          [running] com.akamai.client.plist Support
          [running] com.akamai.single-user-client.plist Support
          [failed] com.apple.CSConfigDotMacCert-[...]@me.com-SharedServices.Agent.plist
          [failed] com.codecm.uploader.plist Support
          [loaded] com.facebook.videochat.[redacted].plist Support
          [loaded] com.parallels.mobile.startgui.launchagent.plist Support
          [not loaded] com.spotify.webhelper.plist Support
          [not loaded] org.virtualbox.vboxwebsrv.plist Support
User Login Items:
          CrashPlan
          Mail
          Calendar
          Messages
          CrashPlan menu bar
          Notes
          Data_wd_3gb
Internet Plug-ins:
          o1dbrowserplugin: Version: 5.4.1.18709 Support
          Google Earth Web Plug-in: Version: 6.0 Support
          Default Browser: Version: 537 - SDK 10.9
          Flip4Mac WMV Plugin: Version: 3.2.0.16   - SDK 10.8 Support
          OVSHelper: Version: 1.1 Support
          AdobeAAMDetect: Version: AdobeAAMDetect 2.0.0.0 - SDK 10.7 Support
          FlashPlayer-10.6: Version: 13.0.0.214 - SDK 10.6 Support
          DivX Web Player: Version: 3.2.0.788 - SDK 10.6 Support
          AdobePDFViewerNPAPI: Version: 11.0.07 - SDK 10.6 Support
          Flash Player: Version: 13.0.0.214 - SDK 10.6 Support
          iPhotoPhotocast: Version: 7.0 - SDK 10.8
          googletalkbrowserplugin: Version: 5.4.1.18709 Support
          QuickTime Plugin: Version: 7.7.3
          AdobePDFViewer: Version: 11.0.07 - SDK 10.6 Support
          SharePointBrowserPlugin: Version: 14.0.0 Support
          Silverlight: Version: 5.1.20913.0 - SDK 10.6 Support
          JavaAppletPlugin: Version: Java 7 Update 55 Check version
Safari Extensions:
          Open in Internet Explorer: Version: 1.0
Audio Plug-ins:
          BluetoothAudioPlugIn: Version: 1.0 - SDK 10.9
          AirPlay: Version: 2.0 - SDK 10.9
          AppleAVBAudio: Version: 203.2 - SDK 10.9
          InstantOn: Version: 7.1.2 - SDK 10.8 Support
          iSightAudio: Version: 7.7.3 - SDK 10.9
iTunes Plug-ins:
          Quartz Composer Visualizer: Version: 1.4 - SDK 10.9
User Internet Plug-ins:
          BlueStacks Install Detector: Version: Unknown
          Picasa: Version: 1.0 Support
          Google Earth Web Plug-in: Version: 7.1 Support
3rd Party Preference Panes:
          Akamai NetSession Preferences  Support
          Flash Player  Support
          Flip4Mac WMV  Support
          FUSE for OS X (OSXFUSE)  Support
          Java  Support
Time Machine:
          Skip System Files: NO
          Mobile backups: ON
          Auto backup: YES
          Volumes being backed up:
                    Macintosh HD: Disk size: 837.91 GB Disk used: 378.34 GB
          Destinations:
                    TimeMachine_wd_3gb [Network] (Last used)
                    Total size: 3 
                    Total number of backups: 2
                    Oldest backup: 2014-05-22 06:57:28 +0000
                    Last backup: 2014-05-22 09:40:04 +0000
                    Size of backup disk: Excellent
                              Backup size 3  > (Disk size 837.91 GB X 3)
          Time Machine details may not be accurate.
          All volumes being backed up may not be listed.
Top Processes by CPU:
               5%          Finder
               3%          WindowServer
               2%          com.apple.iCloudHelper
               1%          hidd
               1%          fontd
Top Processes by Memory:
          426 MB          Safari
          426 MB          WindowServer
          295 MB          savapi
          246 MB          CrashPlan
          229 MB          Dock
Virtual Memory Information:
          4.62 GB          Free RAM
          5.56 GB          Active RAM
          4.30 GB          Inactive RAM
          1.52 GB          Wired RAM
          1.54 GB          Page-ins
          0 B          Page-outs

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