Task Sequence packages not installing after upgrade to R2

Hi all
As the title suggests, I've upgraded my SCCM 2012 server from SP1 to R2. The OSD Task Sequences reach the stage where the client is installed, and ends after this point. However there are several software packages after this step that it is seemingly skipping
entirely now.
Any idea why this might be?
Thanks

Ok,
After banging my head for a few days with that issue i saw the light at the end of the tunnel ( an not the
train) today.
Long story short, the culprit was the boot image. I upgraded to 6.3 and everything in my TSs is working as
it should.
Here are the details:
The recall my issue, after upgrading SCCM from SP1 to R2, none of the software packages were getting installed
in a Task sequence. A TS runs up to the installation of the SCCM agent and then it quits.
Looking at the log file in  C:\Windows\System32\ccm\logs\smstslog I found the following errors:
Resuming Task Sequence in Full OS TSMBootstrap
Failed to get the environment key. TSMBootstrap
Failed to resume task sequence (0x800700EA).
Exiting with return code 0x800700EA TSMBootstrap
Earlier i mentioned that my boot images did not get updated as part of the site upgraded, so i went and updated
them to version 6.3 and after making sure it got deployed in a TS to make it available through PXE, my problem was gone.
this post helped me tremendously to realized that the boot image was the issue:
https://social.technet.microsoft.com/Forums/en-US/a793071d-1a3b-4b68-b6de-6d8c1a1fda0f/failed-to-get-the-environment-key-smstslog?forum=configmanagerosd 
Mario.

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