Trouble with PDF Export from ID CS6

I am having the following problem with PDF exported from an ID CS6 document. I have a couple of pages where a b&w photograph is partly covered by a non-wrapping text frame and in that text frame there is blue text. In ID it looks like this:
It also looks like this in the exported PDF in Apple Preview.app and for most of these pages they also look good in Acrobat Pro. But two are giving me trouble. They look like this:
and sadly, they also look that way when Ingram tries to use them. I export using the typical print format PDF/X-1a:2001
I have a minimal ID document that shows the problem with 3 such pages, one with the problem.

Select one of the troublesome objects and open the attributes panel as well as the effects panel.
Give us a screenshot.

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>
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Workaround for 2 Spot Colors in Gradients (Converts Spot Colors located in Gradient to CMYK – all other Spots stay intact)
Open PDF exported from INDD in Acrobat
Go to Tools > Print Production > Convert Colors
Object Type: Smooth Shade (this tells Acrobat to hone in on Gradients only)
Color Type: Spot Color
Check Embed next to Conversion Profile (should be SWOP)
Expand Document Colors on the right and Select the DeviceN spot color that is located in the Gradient in Color Spaces then click ok
Save the PDF
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