What I did to fix Time Machine in 10.5.3

Thought I'd document this because I just spent about an hour resolving it on two separate machines.
Machines:
New iMac 24" (1 TB HD)
MacBook Pro 15" 2nd generation (120 GB HD)
Time Capsule (1 TB)
*If Time Machine is stuck on Preparing...* Let it go. For whatever reason, the first backup after migrating to 10.5.3 can take an excruciatingly long time (this did not occur with 10.5.1 or 10.5.2). You may see the following messages in your system.log:
May 28 22:02:37 new-host /System/Library/CoreServices/backupd[151]: Event store UUIDs don't match for volume: Macintosh HD
May 28 22:02:37 new-host /System/Library/CoreServices/backupd[151]: Node requires deep traversal:/ reason:kFSEDBEventFlagMustScanSubDirs|kFSEDBEventFlagReasonEventDBUntrustable|
*If you followed others' "advice" and deselected/reselected the backup volume in preferences, and now Time Machine no longer wants to mount the volume automatically; and/or if you see the following in your log*:
May 28 21:58:39 new-host /System/Library/CoreServices/backupd[333]: Network mountpoint /Volumes/Time Capsule not owned by backupd... remounting
May 28 21:58:39 new-host /System/Library/CoreServices/backupd[333]: Failed to remount network volume.
May 28 21:58:44 new-host /System/Library/CoreServices/backupd[333]: Backup failed with error: 19
Try the following:
1.) Go into Time Machine preferences and choose None for disk. This will turn Time Machine off.
2.) Restart the computer. Time Machine should still be off.
3.) Rechoose the proper volume. You should get the excruciatingly long "Preparing Backup" message and see the above "deep transversal" message in your log.
For some reason, there seems to be an issue with the backupd process in 10.5.3. Restarting the computer with Time Machine off then turning it back on seems to fix the issue.

Hi. I'm having similar problems (Time Machine seems to be forever stuck on "Preparing backup" after an update to Mac OS X 10.5.3), but I'm having slightly different symptoms. My setup looks like this:
* Mac OS X -Sever- 10.5.3 Leopard running on a Mac Pro tower
* 1TB LaCie BigDisk plugged directly into the server via FireWire 800, serving as Time Machine volume
Everything was smooth while using Mac OS X Server 10.5.2, but I have updated to Mac OS X 10.5.3 and swapped in a new 1TB drive (to take the old one off-site). I set up Time Machine as before and let it run overnight, but it is still in the "Preparing backup" phase.
Checking the system.log file I can see a huge amount of "Waiting for index to be ready (906 > 0)" messages.
Here are some interesting portions, abbreviated for brevity, of the log. Note the dates
May 30 00:00:14 kringmerk /System/Library/CoreServices/backupd[2363]: Waiting for index to be ready (906 > 0)
May 30 00:00:44 kringmerk /System/Library/CoreServices/backupd[2363]: Waiting for index to be ready (906 > 0)
May 30 00:01:14 kringmerk /System/Library/CoreServices/backupd[2363]: Waiting for index to be ready (906 > 0)
May 30 00:01:44 kringmerk /System/Library/CoreServices/backupd[2363]: Waiting for index to be ready (906 > 0)
May 30 00:02:14 kringmerk /System/Library/CoreServices/backupd[2363]: Waiting for index to be ready (906 > 0)
May 30 00:02:44 kringmerk /System/Library/CoreServices/backupd[2363]: Waiting for index to be ready (906 > 0)
May 30 09:15:17 kringmerk /System/Library/CoreServices/backupd[2363]: Waiting for index to be ready (906 > 0)
May 30 09:15:47 kringmerk /System/Library/CoreServices/backupd[2363]: Waiting for index to be ready (906 > 0)
May 30 09:16:17 kringmerk /System/Library/CoreServices/backupd[2363]: Waiting for index to be ready (906 > 0)
May 30 09:16:47 kringmerk /System/Library/CoreServices/backupd[2363]: Waiting for index to be ready (906 > 0)
May 30 09:17:17 kringmerk /System/Library/CoreServices/backupd[2363]: Waiting for index to be ready (906 > 0)
May 30 09:17:47 kringmerk /System/Library/CoreServices/backupd[2363]: Waiting for index to be ready (906 > 0)
May 30 09:18:17 kringmerk /System/Library/CoreServices/backupd[2363]: Waiting for index to be ready (906 > 0)
May 30 09:18:47 kringmerk /System/Library/CoreServices/backupd[2363]: Waiting for index to be ready (906 > 0)
May 30 09:19:17 kringmerk /System/Library/CoreServices/backupd[2363]: Waiting for index to be ready (906 > 0)
May 30 09:19:47 kringmerk /System/Library/CoreServices/backupd[2363]: Waiting for index to be ready (906 > 0)
May 30 09:20:17 kringmerk /System/Library/CoreServices/backupd[2363]: Waiting for index to be ready (906 > 0)
May 30 09:20:47 kringmerk /System/Library/CoreServices/backupd[2363]: Waiting for index to be ready (906 > 0)
Eventually I just canceled the backup. Then I requested a new backup after turning off Time Machine and turning it back on:
May 30 13:32:50 kringmerk /System/Library/CoreServices/backupd[7620]: Backup requested by user
May 30 13:32:50 kringmerk /System/Library/CoreServices/backupd[7620]: Starting standard backup
May 30 13:32:50 kringmerk /System/Library/CoreServices/backupd[7620]: Backing up to: /Volumes/Eskimo Server Time Machine 2/Backups.backupdb
May 30 13:32:50 kringmerk /System/Library/CoreServices/backupd[7620]: Journaling is disabled on the backup destination volume. Enabling.
May 30 13:32:52 kringmerk /System/Library/CoreServices/backupd[7620]: Event store UUIDs don't match for volume: Macintosh HD
May 30 13:32:52 kringmerk /System/Library/CoreServices/backupd[7620]: Backup content size: 231.0 GB excluded items size: 495.9 MB for volume Macintosh HD
May 30 13:32:52 kringmerk /System/Library/CoreServices/backupd[7620]: No pre-backup thinning needed: 276.57 GB requested (including padding), 931.16 GB available
May 30 13:32:52 kringmerk /System/Library/CoreServices/backupd[7620]: Waiting for index to be ready (909 > 0)
May 30 13:32:57 kringmerk /System/Library/CoreServices/backupd[7620]: Waiting for index to be ready (906 > 0)
May 30 13:33:42 kringmerk /System/Library/CoreServices/backupd[7620]: Waiting for index to be ready (906 > 0)
May 30 13:34:37 kringmerk /System/Library/CoreServices/backupd[7620]: Waiting for index to be ready (906 > 0)
May 30 13:35:07 kringmerk /System/Library/CoreServices/backupd[7620]: Waiting for index to be ready (906 > 0)
May 30 14:02:07 kringmerk /System/Library/CoreServices/backupd[7620]: Waiting for index to be ready (906 > 0)
May 30 14:02:37 kringmerk /System/Library/CoreServices/backupd[7620]: Waiting for index to be ready (906 > 0)
May 30 14:03:07 kringmerk /System/Library/CoreServices/backupd[7620]: Waiting for index to be ready (906 > 0)
May 30 14:03:37 kringmerk /System/Library/CoreServices/backupd[7620]: Waiting for index to be ready (906 > 0)
and it's still going like that, "Waiting for index to be ready." As you can see, every thirty seconds it reports that it's still waiting for the index to be ready. Obviously, I'm prepared for this to take a long time as I've got over 200 GB of data to backup with Time Machine, but should it really take almost 16 hours just to "Prepare"?
Also note the absence of a "Node requires deep traversal" message. I'm not really sure what to try next except perhaps a full restart after shutting down Time Machine, then turning it back on after it starts up.
If that doesn't work, however, do you have any other suggestions I could try?
Thanks,
-Meitar Moscovitz

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    Hans

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    25/04/15 16:17:52,246 storedownloadd[491]: DownloadServiceDelegate: Accepting new connection <NSXPCConnection: 0x7ff598500fa0> connection from pid 487 with interface <DownloadServiceInterface: 0x7ff598506b50> (PID 487)
    25/04/15 16:17:59,751 com.apple.backupd[403]: Starting automatic backup
    25/04/15 16:17:59,995 com.apple.backupd[403]: Backing up to /dev/disk2s2: /Volumes/Backup2/Backups.backupdb
    25/04/15 16:18:00,806 com.apple.backupd[403]: Event store UUIDs don't match for volume: SSD Boot
    25/04/15 16:18:01,454 com.apple.backupd[403]: Deep event scan at path:/ reason:must scan subdirs|new event db|
    25/04/15 16:18:01,455 com.apple.backupd[403]: Running event scan
    25/04/15 16:18:30,853 mdworker[532]: code validation failed in the process of getting signing information: Error Domain=NSOSStatusErrorDomain Code=-67062 "The operation couldn’t be completed. (OSStatus error -67062.)"
    25/04/15 16:18:30,983 mdworker[532]: code validation failed in the process of getting signing information: Error Domain=NSOSStatusErrorDomain Code=-67062 "The operation couldn’t be completed. (OSStatus error -67062.)"
    25/04/15 16:18:32,812 com.apple.xpc.launchd[1]: (com.apple.imdmessageservices.IMDMessageServicesAgent) The _DirtyJetsamMemoryLimit key is not available on this platform.
    25/04/15 16:18:32,812 com.apple.xpc.launchd[1]: (com.apple.imfoundation.IMRemoteURLConnectionAgent) The _DirtyJetsamMemoryLimit key is not available on this platform.
    25/04/15 16:18:50,000 kernel[0]: process MacsFanControl[451] caught causing excessive wakeups. Observed wakeups rate (per sec): 641; Maximum permitted wakeups rate (per sec): 150; Observation period: 300 seconds; Task lifetime number of wakeups: 45544
    25/04/15 16:18:50,539 com.apple.xpc.launchd[1]: (com.apple.ReportCrash[559]) Endpoint has been activated through legacy launch(3) APIs. Please switch to XPC or bootstrap_check_in(): com.apple.ReportCrash
    25/04/15 16:18:50,540 ReportCrash[559]: Invoking spindump for pid=451 wakeups_rate=641 duration=71 because of excessive wakeups
    25/04/15 16:18:53,089 spindump[560]: Saved wakeups_resource.diag report for MacsFanControl version 1.2.1.0 (???) to /Library/Logs/DiagnosticReports/MacsFanControl_2015-04-25-161853_iMac-van-Hans. wakeups_resource.diag
    25/04/15 16:19:18,278 com.apple.backupd[403]: Finished scan
    25/04/15 16:19:18,770 com.apple.backupd[403]: Saved event cache at /Volumes/Backup2/Backups.backupdb/iMac van Hans/2015-04-25-161800.inProgress/C8A10FE4-5356-4E21-81A5-6E3F9C14FF93/.F999C86 6-1B71-3466-8990-9540C593C08A.eventdb
    25/04/15 16:19:18,868 com.apple.backupd[403]: Not using file event preflight for SSD Boot
    25/04/15 16:20:22,939 com.apple.backupd[403]: Will copy (769 bytes) from USERS1
    25/04/15 16:20:22,950 com.apple.backupd[403]: Found 423386 files (11,49 GB) needing backup
    25/04/15 16:20:23,207 com.apple.backupd[403]: 19,66 GB required (including padding), 1,41 TB available
    25/04/15 16:20:50,187 com.apple.xpc.launchd[1]: (com.apple.imfoundation.IMRemoteURLConnectionAgent) The _DirtyJetsamMemoryLimit key is not available on this platform.
    25/04/15 16:20:51,554 cloudphotosd[663]: Unable to register with launch services, result = -10819
    25/04/15 16:20:51,588 com.apple.xpc.launchd[1]: (com.apple.imfoundation.IMRemoteURLConnectionAgent) The _DirtyJetsamMemoryLimit key is not available on this platform.
    25/04/15 16:20:54,027 cloudphotosd[663]: +[CSLogger preferencesChanged:] reconfiguring logging
    25/04/15 16:20:54,244 cloudphotosd[663]: Determine service transition start: service=com.apple.photo.icloud.myphotostream personId=1353114644 lastKnownPersonId=(null) targetState=-1
    25/04/15 16:20:54,244 cloudphotosd[663]: Determine service transition end: 2, currentState: 3, shouldEnableService: 0
    25/04/15 16:20:54,566 cloudphotosd[663]: Determine service transition start: service=com.apple.photo.icloud.sharedstreams personId=1353114644 lastKnownPersonId=(null) targetState=-1
    25/04/15 16:20:54,566 cloudphotosd[663]: Determine service transition end: 2, currentState: 3, shouldEnableService: 0
    25/04/15 16:20:55,464 cloudphotosd[663]: Determine service transition start: service=com.apple.photo.icloud.cloudphoto personId=1353114644 lastKnownPersonId=(null) targetState=0
    25/04/15 16:20:55,464 cloudphotosd[663]: Determine service transition end: 2, currentState: 3, shouldEnableService: 0
    25/04/15 16:20:56,548 cloudphotosd[663]: New connection request from 666
    25/04/15 16:20:57,767 com.apple.photomoments[672]: Photomoments process awakened.
    25/04/15 16:20:57,956 com.apple.photomoments[672]: Connection error while checking Apple Internalness. Error: Error Domain=NSCocoaErrorDomain Code=4099 "Couldn’t communicate with a helper application." (The connection to service named com.apple.CrashReporterSupportHelper was invalidated.) UserInfo=0x7f92a143c050 {NSDebugDescription=The connection to service named com.apple.CrashReporterSupportHelper was invalidated.}
    25/04/15 16:20:58,164 sandboxd[323]: ([672]) com.apple.photom(672) deny mach-lookup com.apple.CrashReporterSupportHelper
    25/04/15 16:20:58,000 kernel[0]: process backupd[403] thread 9125 caught burning CPU! It used more than 50% CPU (Actual recent usage: 50%) over 180 seconds. thread lifetime cpu usage 90.873877 seconds, (42.019109 user, 48.854768 system) ledger info: balance: 90016080142 credit: 90016080142 debit: 0 limit: 90000000000 (50%) period: 180000000000 time since last refill (ns): 179260947065
    25/04/15 16:20:58,968 com.apple.xpc.launchd[1]: (com.apple.ReportCrash.Root[677]) Endpoint has been activated through legacy launch(3) APIs. Please switch to XPC or bootstrap_check_in(): com.apple.ReportCrash.DirectoryService
    25/04/15 16:20:59,150 com.apple.geod[675]: Connection error while checking Apple Internalness. Error: Error Domain=NSCocoaErrorDomain Code=4099 "Couldn’t communicate with a helper application." (The connection to service named com.apple.CrashReporterSupportHelper was invalidated.) UserInfo=0x7f90e9700130 {NSDebugDescription=The connection to service named com.apple.CrashReporterSupportHelper was invalidated.}
    25/04/15 16:20:59,160 sandboxd[323]: ([675]) com.apple.geod(675) deny mach-lookup com.apple.CrashReporterSupportHelper
    25/04/15 16:20:59,367 spindump[560]: Saved cpu_resource.diag report for backupd version ??? (???) to /Library/Logs/DiagnosticReports/backupd_2015-04-25-162059_iMac-van-Hans.cpu_res ource.diag
    25/04/15 16:21:56,492 mdworker[738]: code validation failed in the process of getting signing information: Error Domain=NSOSStatusErrorDomain Code=-67062 "The operation couldn’t be completed. (OSStatus error -67062.)"
    25/04/15 16:21:56,620 mdworker[738]: code validation failed in the process of getting signing information: Error Domain=NSOSStatusErrorDomain Code=-67062 "The operation couldn’t be completed. (OSStatus error -67062.)"
    25/04/15 16:23:29,049 com.apple.backupd-helper[68]: Not starting scheduled Time Machine backup: Backup already running
    25/04/15 16:23:39,154 com.apple.xpc.launchd[1]: (com.apple.imfoundation.IMRemoteURLConnectionAgent) The _DirtyJetsamMemoryLimit key is not available on this platform.
    25/04/15 16:23:39,795 com.apple.xpc.launchd[1]: (com.apple.imfoundation.IMRemoteURLConnectionAgent) The _DirtyJetsamMemoryLimit key is not available on this platform.
    25/04/15 16:29:15,765 com.apple.xpc.launchd[1]: (com.apple.DataDetectorsDynamicData) The JoinExistingSession key is only available to Application services.
    25/04/15 16:29:15,766 com.apple.xpc.launchd[1]: (com.apple.appkit.xpc.sandboxedServiceRunner) The JoinExistingSession key is only available to Application services.
    25/04/15 16:29:31,510 com.apple.xpc.launchd[1]: (com.apple.imfoundation.IMRemoteURLConnectionAgent) The _DirtyJetsamMemoryLimit key is not available on this platform.
    25/04/15 16:29:35,483 mdworker[293]: SCNetworkReachability server not available
    25/04/15 16:29:35,484 mdworker[293]: SCNetworkReachability server not available
    25/04/15 16:29:35,487 mdworker[293]: bootstrap_look_up2 failed with 0x44c
    25/04/15 16:29:35,487 mdworker[293]: IOPMConnectionCreate failed, 0xe00002c9
    25/04/15 16:29:35,719 sandboxd[323]: ([293]) mdworker(293) deny mach-lookup com.apple.SystemConfiguration.SCNetworkReachability (import fstype:hfs fsflag:480D000 flags:5E diag:0 isXCode:0 uti:public.html plugin:/Library/Spotlight/RichText.mdimporter - find suspect file using: sudo mdutil -t 2310261)
    25/04/15 16:29:35,754 sandboxd[323]: ([293]) mdworker(293) deny mach-lookup com.apple.PowerManagement.control (import fstype:hfs fsflag:480D000 flags:5E diag:0 isXCode:0 uti:public.html plugin:/Library/Spotlight/RichText.mdimporter - find suspect file using: sudo mdutil -t 2310261)
    25/04/15 16:31:03,369 com.apple.backupd[403]: Copied 223515 items (1,65 GB) from volume SSD Boot. Linked 210906.
    25/04/15 16:31:32,355 com.apple.backupd[403]: Copied 14 items (861 bytes) from volume USERS1. Linked 119.
    25/04/15 16:31:35,323 com.apple.backupd[403]: Created new backup: 2015-04-25-163135
    25/04/15 16:31:35,517 com.apple.xpc.launchd[1]: (com.apple.imfoundation.IMRemoteURLConnectionAgent) The _DirtyJetsamMemoryLimit key is not available on this platform.
    25/04/15 16:31:35,000 kernel[0]: hfs: mounted Recovery HD on device disk0s3
    25/04/15 16:31:35,871 mds[57]: (Volume.Normal:2464) volume:0x7fb9c213e000 ********** Bootstrapped Creating a default store:0 SpotLoc:(null) SpotVerLoc:(null) occlude:0 /Volumes/Recovery HD
    25/04/15 16:31:35,918 fseventsd[44]: Logging disabled completely for device:1: /Volumes/Recovery HD
    25/04/15 16:31:35,932 com.apple.backupd[403]: Copying OS X Recovery set
    25/04/15 16:31:59,320 mdworker[290]: (ImportBailout.Error:1325) Asked to exit for Diskarb
    25/04/15 16:31:59,320 mdworker[292]: (ImportBailout.Error:1325) Asked to exit for Diskarb
    25/04/15 16:31:59,322 mdworker[293]: (ImportBailout.Error:1325) Asked to exit for Diskarb
    25/04/15 16:31:59,328 mdworker[291]: (ImportBailout.Error:1325) Asked to exit for Diskarb
    25/04/15 16:31:59,330 mdworker[885]: (ImportBailout.Error:1325) Asked to exit for Diskarb
    25/04/15 16:31:59,334 mdworker[294]: (ImportBailout.Error:1325) Asked to exit for Diskarb
    25/04/15 16:31:59,334 mdworker[295]: (ImportBailout.Error:1325) Asked to exit for Diskarb
    25/04/15 16:31:59,335 mdworker[296]: (ImportBailout.Error:1325) Asked to exit for Diskarb
    25/04/15 16:31:59,337 mdworker[297]: (ImportBailout.Error:1325) Asked to exit for Diskarb
    25/04/15 16:31:59,337 mdworker[530]: (ImportBailout.Error:1325) Asked to exit for Diskarb
    25/04/15 16:31:59,339 mdworker[788]: (ImportBailout.Error:1325) Asked to exit for Diskarb
    25/04/15 16:31:59,339 mdworker[327]: (ImportBailout.Error:1325) Asked to exit for Diskarb
    25/04/15 16:31:59,340 mdworker32[1077]: (ImportBailout.Error:1325) Asked to exit for Diskarb
    25/04/15 16:31:59,000 kernel[0]: hfs: unmount initiated on Recovery HD on device disk0s3
    25/04/15 16:32:00,119 com.apple.backupd[403]: Starting post-backup thinning
    25/04/15 16:32:00,120 com.apple.backupd[403]: No post-backup thinning needed: no expired backups exist
    25/04/15 16:32:00,133 com.apple.backupd[403]: Backup completed successfully.
    25/04/15 16:32:44,591 WindowServer[181]: CGXGetConnectionProperty: Invalid connection 54279
    Am I wrong or is the recovery set still " under fire"?

  • What's the point of Time Machine

    After clearing up this 10.5.6 bug on Time Machine it got me wondering what the benefit of TM really is. I am a photographer dealing with large files but I never work on a single photo for more then one hour. My method of backing up is simple... download raw images from the CF card to the OS disk that I'll be working from as well as to two internal HD backup disks. As I work I put finished photos in a "finals" folder that is copied onto the backups as I go along. Indeed if the OS disk goes down while I'm working I have the raw files on two backups plus the finals folder as I may have backed up in that time frame. I understand TM will provide me with a fall back to previous edits of a single image but even so, this seems like a waste of a hard drive and perhaps more trouble than it's worth for the small effort to drag and drop occasionally. Perhaps TM is better for video work or am I missing something elemental here?

    Carl,
    CarlKramer wrote:
    Excellent info, thanks. Two questions about the post.
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    Easy. Copy all the data to a second drive or volume, delete it from the first, then copy it back (or not). The most logical scenario is one where "live" data (that which is being edited or otherwise managed) is kept on one drive temporarily. When it reaches a state where the files will remain "static" in the future, those files are copied to the second drive/volume and deleted from the first. Since files will be written to the second "archival" drive sequentially, then never modified or moved again, fragmentation will always remain at essentially zero for that drive.
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    Lets say I get a disk error and my boot system goes down. If I have been backing up the boot drive to an external with TM, what are the steps I would take to get total recovery?
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    Unlike a "normal" installation of OS X, restoring a backup is dependent only on the direct transfer speed from the backup drive. Where a bare installation of Leopard might take as long as 2 hours, a restoration of Leopard plus all applications and user data takes only minutes (in my case, 45).
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    P.S. If fragmentation on a startup disk becomes and issue (rare with OS X, but it can happen with the types of file mentioned earlier), restoring from a Time Machine backup after an erasure can be an excellent solution! -s

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