When transferring data from an old hard drive to a new one, is there a way to keep alias files and folders in tact?

My mac and I rely HEAVILY on the use of alias files and folders. The simple version of my question is: When transferring data from an old hard drive to a new one, is there a way to keep alias files and folders in tact?  These are not symlinks or symbolic links, they're all alias files and folders. 
Is there any software out there that might help me with a solution?  Are there any tricks or tips you can give me to try?

Use either Setup Assistant at first start, or Migration Assistant on subsequent occasions and all will be transferred intact. Given your wording I presume you are Unix savvy and will appreciate the problems that duplicate userids would cause, so of you use MA for the migration, make sure the target Mac has no userid equal to that on the source and you will be fine.
SA does not have these issues since it runs before any user account is created, so it can simply copy over everything. But MA runs after the fact and only solves the issue partially by changing the UID in the user directory, leading to permission problems.

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