Why does is my mac running so slow even after fresh install?

EtreCheck version: 1.9.11 (43) - report generated June 4, 2014 at 11:07:16 PM EDT
Hardware Information:
          MacBook Pro (15-inch, Late 2008)
          MacBook Pro - model: MacBookPro5,1
          1 2.4 GHz Intel Core 2 Duo CPU: 2 cores
          8 GB RAM
Video Information:
          NVIDIA GeForce 9400M - VRAM: 256 MB
          NVIDIA GeForce 9600M GT - VRAM: 256 MB
System Software:
          OS X 10.9.2 (13C1021) - Uptime: 12 days 7:10:27
Disk Information:
          Hitachi HTS543225L9SA02 disk0 : (250.06 GB)
                    EFI (disk0s1) /Volumes/firmwaresyncd.bTix74: 209.7 MB (186.5 MB free)
                    Mac HD (disk0s2) / [Startup]: 249.2 GB (128.92 GB free)
                    Recovery HD (disk0s3) <not mounted>: 650 MB
          MATSHITADVD-R   UJ-868 
USB Information:
          Apple Inc. Built-in iSight
          Apple Computer, Inc. IR Receiver
          Apple, Inc. Apple Internal Keyboard / Trackpad
          Apple Inc. BRCM2046 Hub
                    Apple Inc. Bluetooth USB Host Controller
Gatekeeper:
          Mac App Store and identified developers
Launch Daemons:
          [loaded] com.oracle.java.Helper-Tool.plist Support
Launch Agents:
          [running] com.oracle.java.Java-Updater.plist Support
User Launch Agents:
          [loaded] com.google.keystone.agent.plist Support
User Login Items:
          iTunesHelper
          Dropbox
          Google Drive
          Google Chrome
          HazelHelper
Internet Plug-ins:
          Default Browser: Version: 537 - SDK 10.9
          QuickTime Plugin: Version: 7.7.3
          JavaAppletPlugin: Version: Java 7 Update 45 Check version
Safari Extensions:
          Evernote Web Clipper: Version: 6.1
          Open in Internet Explorer: Version: 1.0
          1Password: Version: 4.1.0
Audio Plug-ins:
          BluetoothAudioPlugIn: Version: 1.0 - SDK 10.9
          AirPlay: Version: 2.0 - SDK 10.9
          AppleAVBAudio: Version: 203.2 - SDK 10.9
          iSightAudio: Version: 7.7.3 - SDK 10.9
iTunes Plug-ins:
          Quartz Composer Visualizer: Version: 1.4 - SDK 10.9
3rd Party Preference Panes:
          Hazel  Support
          Java  Support
          teleport  Support
Time Machine:
          Skip System Files: NO
          Auto backup: YES
          Volumes being backed up:
                    Mac HD: Disk size: 232.09 GB Disk used: 112.02 GB
          Destinations:
                    LaCie [Local] (Last used)
                    Total size: 465.64 GB
                    Total number of backups: 41
                    Oldest backup: 2014-01-10 05:53:37 +0000
                    Last backup: 2014-06-05 02:09:56 +0000
                    Size of backup disk: Adequate
                              Backup size 465.64 GB > (Disk used 112.02 GB X 3)
          Time Machine details may not be accurate.
          All volumes being backed up may not be listed.
Top Processes by CPU:
              18%          mds
               3%          WindowServer
               1%          fontd
               0%          ocspd
               0%          Dropbox
Top Processes by Memory:
          156 MB          com.apple.IconServicesAgent
          131 MB          Dropbox
          123 MB          softwareupdated
          115 MB          Google Chrome
          115 MB          Google Drive
Virtual Memory Information:
          3.56 GB          Free RAM
          2.57 GB          Active RAM
          835 MB          Inactive RAM
          819 MB          Wired RAM
          1.34 GB          Page-ins
          0 B          Page-outs

flytnn,
after a fresh install, Spotlight will need to reïndex the files on your internal disk — that happens each time a fresh installation takes place.
I see that you have OS X 10.9.2 installed. Are you planning on installing the 10.9.3 update?
Your installed version of Java is outdated — the most recent version can be downloaded from here.

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