'09 Mac Pro 8 Core 2.93ghz with Raid Card

Last year Apple swapped an '08 to '09 machine to solve a raid-battery issue in the original raid card of the '08 machine. Battery would fail to recondition after about the second attempt. It took a year of calling Apple and finally they came through supplementing version 1 raid card with version 2 and a new machine.
The error was noted in the RAID utility '08 machine as (Battery Failed(0x0#=18)).
As it happens, I don't use RAID but needed the card at first purchase to run fast SCSI drives for music production within the machine as I transport the machine to various venues and they had to be contained within for my applications. When I purchased the machine I also purchased the SCSI drive. It was about a 9K investment with ram. I always buy Apple Care fortunately.
Now, I have this '09 machine which yesterday exhibited the same raid card battery conditioning failure on about the second or third reconditioning attempt so I called Apple today and they are sending a replacement battery.
The reason I post this here is that this error described above is exactly what happened on the '08 machine and it's raid card. Apple's first attempt to repair starts with the battery, then replacement of the entire raid card if that does not work, then finally they do whatever is required to solve the problem. All this is good but it takes allot of my time and I need the machine to function now.
Please note, If I ran the machine less the raid card and say 4 WD raptor drives I would have none of these issues and similar speed per drive internally. This is exactly what I asked for back on the original machine. I just wanted to be done with attempting a raid/mac machine. The machine upgrade was fine but I hope were not looking at another year to sort all this out again.
I wondered if anyone else out these purchase a Mac Pro with this configuration and has had similar experiences they might share?
I really don't want another year to go by before it's rectified although with this new RAID version 2 possibly I'm ok. Any advance sharing of info would be greatly appreciated as I wait for the battery replacement coming in a few days in attempts to fix the problem. Unfortunately, this could be a temporary fix allowing only a few months of operation prior to another failure, we'll see. This machine is a mission critical one used every day for production.
Thanks for reading this post.
GB

I have almost never read anything good about Apple Pro RAID, and try to steer people away ever since 2007 when it came out...
Still have a closet full of ATTO and Adaptec SCSI but times have changed.
WD is even coming out with 600GB 10K VelociRaptor for $299.
And there seems to be a new rash of RAID and battery questions popping up again.
Audio and music use to mean you needed Fibre and SCSI and the lowest latency, probably even now. But Apple internal RAID?
Any reason why can't be external? Maybe see about replacing with Apple FC or 3rd party?

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