0IC_C03 : Receipts as -ve qty in Issue

We are implementing Inventory management Non-Cumulative scenario for a pharama company .The setup has been done as per the 'How to' doc avaialble on SDN .Process key has been activated for Industry Sec = Standard.
            When we compare the Receipts and Issue qty in BW with those given by R/3 transaction MB5B,MB51 we find that receipt qty for certain movement type has been added to Issue qty total stock witha -ve sign . So when we report Recpt and Issue stock the data doesn't match.
Can anybody please reason out the issue for me ?
We are now planning to write some BW routines to manipulate the data.Any suggestion are highly appreciated.
Thanks,
Gautam

Thanks Anajali.
Your response has patially solved issue .There were some quantities that were vendor consignements (stock category = K ) and were considered in BW receipts and issue but not in r/3 mb5b .
We resolved the main issue by using a routine .
Granting you the partial points.
Thanks!

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    PS: Assigning point to the helpful answers is the way of saying thanks in SDN

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    Dear Guys,
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