10.4.7 sound output source is broken

If I go to System Preferences -> Sound -> Sound Effects -> "Play alerts and sound effects through", the pulldown menu is grayed out.
Sometimes applications sounds completely disappear and do not play through the speakers. This happens to Mail and the Finder. I didn't have any problems like this before updating to 10.4.7.
Is anyone else experiencing this?

I just verified with 10.4.6, and 10.3.9 which I have backups of that you can only have one output source at a time. So that menu in Apple menu -> System Preferences -> Audio -> Sound Effects will always be grayed out, and auto update itself when you plug in something or remove something from the sound output port of the Mac. There is another bug that causes some programs to not give audio out in machines like yours and mine. Applications -> Utilities -> Audio Midi setup defaults itself to 96 Hz on machines with SPDIF out after certain updates including 10.4.7. Setting it for 44.1 Hz on Audio Output will fix the audio out problem on many a program and restarting. Sometimes you need to also zap the PRAM:
http://docs.info.apple.com/article.html?artnum=2238

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