10.5.4 upgrade failure - can't repair permissions: "no valid packages"

I just ran the 10.5.4 combo updater to upgrade from 10.5.3 but now I can't boot into the main boot drive (get the circle with line through it instead of login screen). Fortunately I have Panther on another drive and was able to boot into it via the Leopard install disk Startup Drive utility. From there I've run Disk Utility and Techtool Deluxe which reports the Leopard drive is okay, but when I run Repair Permissions on that drive I get the following error:
Repairing permissions for “HD One”
Error: No valid packages (-9997)
Permissions repair complete
From the other posts about problems with 10.5.4 upgrade it looks like I have to run an Archive and Install of 10.5.0 again and then upgrade from there, but is there a problem with the drive that I need to attend to first?
Further complicating things is that the Leopard boot drive is a 320gb drive that was partitioned to a 120gb main drive + second using Speedtools ATA Cap drive utility because this G4PM can't recognize larger size drives. So I'm reluctant to do an erase of the main drive and then reinstall of Leopard.
Any suggestions?

I have Panther on another drive and was able to boot into it via the Leopard install disk Startup Drive utility. From there I've run Disk Utility and Techtool Deluxe which reports the Leopard drive is okay, but when I run Repair Permissions on that drive I get the following error:
Repairing permissions for “HD One”
Error: No valid packages (-9997)
Bad move trying to repair a Leopard disk with something from Panther or Tiger. They're not compatible. As for the permissions, the receipts structure is totally different that's why it can't do the job.
As for using the SpeedTools thing, I have no idea. Your best bet is to get another ext FWHD and install Leopard onto to it, use the Migration Assistant to transfer your stuff from the hosed volume, and see if that works. If so, then use Carbon Copy Cloner or SuperDuper! to clone the FWHD installation to the hosed volume.

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    Message was edited by: Sascha H-K
    Message was edited by: Sascha H-K
    Message was edited by: Sascha H-K

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