10.9.3 upgrade trashed all my files !!!

Just upgraded to 10.9.3 and several of my accounts
have been partially deleted, i.e. everything expect
my working files.
Everything in Library was deleted.
Has anyone else experieved this?

Yeah quite sure. Nothing in ~/Library except new account structure.
When I logged into different unrelated accounts it took me through
the signing onto iCloud procedure and then it told me it's 'setting-up'
my system with those three bullit point animations.
All preferences, keychains and mail has just disappeared.
Fortunately, I have Time Machine. I took one of my accounts back to
before I upgraded the system and it just goes through the same process.
This Maverick release has been just been one long nightmare.

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