2010 Mac Pro not waking with Mavericks

Processor  2 x 2.4 GHz Quad-Core Intel Xeon
Memory  6 GB 1066 MHz DDR3 ECC
Graphics  ATI Radeon HD 5770 1024 MB
Software  OS X 10.9.4 (13E28)
Internal drives: Mac HD 1TB. Disk 2: 750MB. Disk 3: 2 TB. Disk 4: 1 TB
My mid-2010 Mac Pro is sometimes not waking after it is in sleep mode. I was able to start it again after disconnecting peripherals, disconnected power for the allotted time, zapped PRAM. Did a disk repair with Disk Utility. Is there anything else I should be doing? Also generated this message in console/diagnostic and usage messages:
8/8/14 11:43:30.575 AM powerd[16]: com.apple.message.domain: com.apple.sleep.failure
com.apple.message.signature: Platform Failure
com.apple.message.summarize: YES
Sender_Mach_UUID: 83C854AA-0FB9-30C2-8443-D10D781E0E25
Perhaps related to this I cannot use Time Machine on a WD 2TB hd since Mavericks installed. When I switched windows while it was backing up it would display an "device unmounted without ejecting". Now it does not mount at all.
Thanks

Sleep – Slow Wakeup/Requires Reset
Sleep - Wakeup
Can you see the drive in Applications/Utilities/Disk Utility?

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