648 Max - Identifying but not using both RAM modules

Hi!
I'm totally new here, just stumbled across this forum while googling for a solution to my problem, so please excuse my lack of proper terminology if that should occur.
I have the following system (data obtained from Everest 2.20 and own brain):
P4 2,80 GHz, no OC, no HT
2x Crucial PC2700 DDR-DIMM 1024MB 2,5-3-3-7 @ 166 MHz
MSI 648Max (MS-6585)
PowerColor Radeon X1950Pro AGP 256MB GDDR3, no OC
Thermaltake Toughpower 850W Modular
Hitachi Deskstar T7K250 160GB IDE
BIOS (this is my weak spot...) Everest says BIOS type AMI, dated 28/1/2003, no info other than that
WinXP Home SP3 + all updates AFAIK
In general, the system is originally ready-built Fujitsu-Siemens system from 2002 (i think), but heavily modified by me (RAM upgrade, HDD upgrade, several GPU and PS upgrades).
My problem is that the computer only occasionally uses both RAMs (i.e. showing 2,00GB RAM in My Computer's properties). More often than not, however, it only shows 1,00GB RAM. AFAIK this problem is pretty recent, and did not occur when the RAM was new and installed by me. I have tried to systematically testing the two different RAM modules separately in each of the three DIMM slots, and the computer booted and ran Windows desktop at idle without problems in all configurations. I therefore dismissed the possibility of both MB and RAM failure, and reinstalled both modules in DIMM 1 & 2, where they have always been located. The computer ran with 2,00GB of RAM for a day, then reverted back to only 1,00GB the next morning. Tried moving the RAM in DIMM 2 to DIMM 3, and the computer ran another day on 2,00GB. However, this morning it was back to 1,00GB again.
Through all this, Everest 2.20 has always detected both RAMs in the correct slots, but have displayed 1024 and 2048MB memory on the System Summary page. Rebooting the computer without dismantling it and fiddling with the modules does apparently not change the usable amount of RAM back to 2,00GB when stuck at 1,00GB.
Anybody know what the issue might be (since none of the components seem to be faulty by themselves) and how to solve it? Please keep in mind that my BIOS skills are shoddy at best (but successfully flashed the BIOS once by help of an official guide, no stability issues after the upgrade), so detailed instructions regarding that might be a bit over my head. The same goes for overclocking or manually adjusting any voltages or freqs, which I've never tried.
Thanks in advance!
EDIT: Apparently a total power-off reboot (power down, PS power switch off, push and hold power button till lights go out, switch back on, power up) seems to reset the RAM to the correct amount of 2GB. Any clues?

The voltage to the memory might need to be raised one notch.  That adjustment is done in the bios.
You can download the motherboard manual from this link.  http://global.msi.com.tw/index.php?func=downloadfile&dno=3576&type=manual
Section 3 page 27 thru 28 cover the adjustment of the memory voltage.
This is for a retail motherboard.  I do not know if your motherboard has this in its bios.  It is in a section under Frequency/Voltage Control

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