7D Internal Flash (sync?) Problem HELP.

I recently got my 7D back after it was being fixed for a broken cf pin.
The problem now lies with the flash, the flash DOES pop and it does fire, but there's no flash effect on the photo sometimes. Heres 2 photos, same settings but 1 is iso 1600 and the second is iso 2000.
Both photos the flash did pop and did fire.

creepyNick wrote:
This is the problem, i can provide a few other examples where the flash did fire (Not only pre fire) and XIF data shows that the flash fired as proof, but isn't showing in the image. The flash was not covered.
Obviously i'm speculating but it is almost as if the flash fires too early or late so that it is not captured in the image? I can't think of why this happens, I never had this problem before the cf card reader replacment. 
Firing too late is hard to envision, but firing too early (or appearing to) could result from a sticky first shutter curtain. Possibly the mechanism got damaged when they dismantled the camera to get at the CF socket.
If the problem is that closely tied to the repair, I'd be inclined to send the camera back to the shop. Even if the problem appeared to go away, how could you be sure, given that it's sporadic anyway?
Can you reproduce the problem with an external speedlight instead of the internal flash? If not, it suggests that the problem may be electrical rather than mechanical.
I assume that you've ruled out sluggishness in the pop-up mechanism. That should affect only the first shot in a sequence, since I believe the flash will stay up until it's pushed back down.
Bob
Boston, Massachusetts USA

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