A book file in InDesign CS3 (.indb) - Mac and PC - crashing issue

Several months ago, I posted that when I indexed a 300-page book with lots of chapter, generating the index crashed InDesign. This happened initially on a PC running Windows XP home. When I took the book to a Macintosh, it happened also.
One thing I had done, and I don't know if this makes a difference, is changed words that already had index tags attached to them.
It has been several months since I've tried this - I've been waiting until this book was completely written before trying again. 
Since this happened, I've also tried to synchronize styles and that also crashed InDesign. Before the index 'broke', both generating the index and synchronizing styles worked like perfectly - amazing functions of InDesign and makes working with a book much easier.
Now the book is ready. I stripped all of the index codes from the entire book using search and replace, and then the first time I tried to open the Index window, it crashed again.
When it recovered, there was a message that 5 of my 24 documents in this book may be damaged.
So I tried opening the indb file, opening the Indexing window, THEN opening the book files and it crashed. I was able to get the error message this time: An exception unkown software exception (0xc000000d) ocurred in the application at location 0x78138aa0. Click OK to terminate the program.
When InDesign came back up, I closed the Index window and was able to open all of the book's files with no problem.
My questions are:
1 - Is there any way to find out where/how those files are damaged?
2 - Does anyone know what may cause an Index generation or style synchronization to crash InDesign - and then not fix the problem?
3 - Could this be something other than the index, and how do I figure out what it might be?
This book is now 374 pages in 24 documents, and I don't think there is a way to go backwards in the InDesign process at this point.
I'm not sure how clear I'm being with all of this, but the book is to go to the printer Monday and I can't index it.
I'd appreciate any help I can get.
Thanks so much,
Marcy

Just to add to Eugene's recommendation. Q2ID is worth every last dime of the $200 it cost.
I just upgraded to the latest version when I received 25 Quark files to convert for an iPad app. Even for early Quark files that InDesign can open, it does a better job.
BTW, it's also worth noting here that Adobe cannot legally have InDesign open anything later than Quark 4.x files due to the encryption used in Quark 5 and later files. Quark is too dependent on Markzware for XTensions to go after them.
Bob

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