ABAP user for portal

Dear Experts,
We have a BI 7.0 EH1 installation on a single server with 2 separate instances for ABAP and JAVA currently. All configurations are currently okay and we are able to deploy infoproviders, load data and view them on Bex.
Currently, we are unable to utilize ABAP users for any activity on the portal, be it administration or execution of Bex for queries. We are also unable to see the ABAP system in Java currently in the configuration settings. I would like to use the ABAP user for execution of queries. SSO is configured  and we do not have any errors while executing the support desk tool.
Kindly provide any solutions pertaining to this issue.
Thanks & Regards
Suneeth

Hi Surya ,
When you install portal or any NW component with ABAP stack , ABAP stack hold precidence over the JAVA Stack , refer to this link to have more idea on this .
http://help.sap.com/saphelp_nw2004s/helpdata/en/2b/306bb5bc98f24f8a85d489449af456/frameset.htm--
http://help.sap.com/saphelp_nw04s/helpdata/en/12/7678123c96814bada2c8632d825443/frameset.htm
Thanx
Pankaj

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