AC701 PCIe doesn't get enumerated on workstation?

Hi,
I am testing PCIe interface of AC701. To test I am following xtp227-ac701. I downloaded rdf0225-ac701-pcie-c-2015-1 from site. I downloaded the bit file from ready_to_download to my AC701 board. After plugging in the board in PCIe slot and booting up the workstation. I don't see Link up LED glowing. Rest of the LEDs are working fine. Also when I type lspci in shell , I don't see Xilinx device listed there. My workstation has mother board ASUS P7H55-V and I am running fedora 18 on it.
Similarly when I downloaded the bit file from rdf0276-ac701-base-trd-2015-1, I see the same status of LEDs, (link up =0, Rest are functioning as indicated in UG964). Any suggestion?
Regards
Abdul Basit
 

Ok,
This  is how I setup for PCIe.
Workstation ASUS Rampage II Gene (Intel X58) (Recomended for PCIe TrD)
2 Different borads of AC701(BIST is passed for both boards).
Bit files(mcs for flash) for PCIe example design present in ready_to_test folder in rdf0225-ac701-pcie-c-2014-2 and rdf0225-ac701-pcie-c-2015-1.
Bit files(mcs for flash) for PCIe target reference design present in ready_to_test folder in rdf0276-ac701-base-trd-2014-2 and rdf0276-ac701-base-trd-2015-1.
Jumper settings J12=3,4
switch settings sw1= 001, sw2=0000
After loading mcs file for all designs mentioned above, AC701 is plugged into workstation. But none of the time PCIe link is getting up (LED for PCIe link up is not glowing) and hence PCIe doesn't get enumerated . what else I can do, I have done all recomended steps. I believe that these are golden things and they should work flawlessly. But to my disapointment I couldn't even see these working.  Please help me out here.
Regards

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