Adobe Acrobat X Pro ZIP Compression Creates Larger Files

Hello,
I made a flyer in InDesign CS 6 which contains a fairly complicated vector image made with Illustrator. When I export to PDF, InDesign creates a file of the size of 26 MB (ish). I then run preflight in Acrobat which finds that the vector image isn't compressed.
Note that my PDF settings in InDesign are set to bicubic subsampling for colour images that are above 450 px and JPG compression.
When I tell Acrobat to apply fixes, it tries to apply ZIP compression but the file size is then 38 MB. Could anyone shed light on this for me please? There is obviously something basic about vector images and compression that I am missing.
It also finds elements that are completely off the board, although I didn't put anything there with InDesign.

Test Screen Name: After seeing your response I run a little test. I made a PDF straight from Illustrator just using that image then preflighted it and I got the same error.
I then opened that same PDF in Illustrator, a lot of that artwork was turned into images. I think it's the transparency flattener as I am converting to PDF/X-1A with compatibility for Acrobat 4 (which I should have probably mentioned in the first post but I didn't make the connection between the two). As far as I understand the transparency flattener converts an image into a mix of paths and rasters (according to Adobe's own help files.)
Preset used for preflight is sheetfed offset CMYK btw.

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Adobe Acrobat X Pro ZIP Compression Creates Larger Files

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