After installing 10.8.3 on Mac Pro, finder stops responding after 7-8 hours

A week or two ago I installed the 10.8.3 update to my Mac Pro at work. Ever since, towards the end of every work day, after 7-8 hours of continuous work, the finder will just stop responding. I am usually alerted to this by trying to open a new file, only it won't open. I am then unable to restart or **** down and am forced to do a hard shut down to turn off the machine. Upon starting up the machine again, I do a permissions repair, then restart again. Then everything will work fine for another 7-8 hours. If I leave my machine on overnight, it won't work when I arrive for work in the morning, and I'll have to repeat the process above.
I have tried running the free Maintenance software from Titanium Software, and that has not solved the problem. I was also concerned about font issues, so I ran the free version of FontDoctor, and it reported a bunch of things to fix. But I do not want to spend the $70 on the full version if that's not going to fix the problem.
I spoke with an IT guy I work with, and he said it might be worth dealing with the hassle until the 10.8.4 update arrives.
Any other suggestions?

Back up all data.
Launch the Font Book application and validate all fonts. You must select the fonts in order to validate them. See the built-in help and the support article linked below for instructions. If Font Book finds any issues, resolve them, then boot in safe mode* (by holding down the shift key at the startup chime) to rebuild the font caches. Boot again as usual and test.
Mac 101: Font Book
*Note: If FileVault is enabled under OS X 10.7 or later, or if a firmware password is set, or if the boot volume is a software RAID, you can’t boot in safe mode. In that case only, after running Font Book, launch the Terminal application in any of the following ways:
☞ Enter the first few letters of its name into a Spotlight search. Select it in the results (it should be at the top.)
☞ In the Finder, select Go ▹ Utilities from the menu bar, or press the key combination shift-command-U. The application is in the folder that opens.
☞ Open LaunchPad. Click Utilities, then Terminal in the icon grid.
Drag or copy — do not type — the following line into the Terminal window, then press return:
sudo atsutil databases -remove
You'll be prompted for your login password, which won't be displayed when you type it. You may get a one-time warning not to screw up. After running the command, reboot as usual.

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