After reformatting hard drive, iPod syncs very slowly with iTunes

A couple of months ago I had to reformat my computer's hard drive. I keep all my music files on an external hard drive. After reformatting, the man who did this for me reloaded iTunes for me and imported all my music back into my iTunes library.
It seems that since that time, when I sync my iPod to the iTunes library, it takes many times longer than it used to. Maybe something else happened to my iPod or iTunes and the reformat is just a conincidence, but it really does seem to take three or four times longer to sync.
I have iTunes 7.4.1.2 and my iPod is an older one, a 40G with dock connector
Also, I recently bought some audiobooks to put on my iPod. I only had about 600megs available so the iPod would not sync. I then removed several Gigs from my iTunes library. When I click on the "music" icon under "library" it shows that I have only a little over 29G used which should leave well over 5 plus Gigs available for the new music. But when I try to sync the iPod, it gives me the message that I have only approx. 600 megs available. What's up. I never have had this problem before and I have had the iPod for several years.
Any ideas or suggestions?
Thanks,
Dennis

I actually learned yesterday that Apple didn't put USB 2.0 in their Macs until G5... something I was VERY irritated to find out. Turns out they were betting that Fire Wire would take off instead of USB 2.0, so they only equipped their machines with USB 1.1. So as a result, my iPod is unacceptably slow. Other nagging problems like this are convincing me that I'll have to get a new Mac Pro in the coming year, but for the meantime I think I'll be buying a USB 2.0 PCI card.
Thanks for your response.

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