After Rendering Project is screwed up

Hi,
I'm currently working on my first wedding video with my new iMac that I got 2 weeks ago. On v1 I have one long clip that I shot on a tripod and on v2 I have short clips from a camera that I was walking around with. I had the whole timeline set up and working and then I decided to do some color correction on v1 because it was a little washed out. So I did a little color balance and messed with the levels and everything looked fine. I went to Render All and then went to bed. When I looked at it this morning the video on v1 was sped up and also completely black at some points (although when you scrub through it you can see the video). I unchecked the color balance and levels and it went back to normal. Anybody come across this problem? It seems like I had the same problem when trying to set up a slideshow. I have version 7.0.

Ok I'm home now looking at my project. Here is the overview of what I've done.
On v1 I have footage that I took with the Canon HDV30 and the format of this footage is 1440x1080 MPEG2 Video, Linear PCM. The camera was set at HDV (PF)30. This camera was on a tripod and filmed the whole wedding so it just one long clip
On v2 I have footage that I took with the Canon 5D Mark II. The recording size is set at 1920x1080 at 30 fps (which i think is 29.97 fps after updating the firmware). I put this footage in compressor and converted it to ProRes 422 LT 1440 x 1080 Custom (16:9). I took sporadic shots with this camera and put little clips on v2.
The Sequence Settings are Frame Size 1440x810 Custom (16:9)
Pixel Aspect Ratio HD (1440x1080)
Quickime Video Settings Compressor HDV1080i60
Everything was working great until I did a little color correction on v1 because it was a little washed out. Even after i did that it was fine until I woke up today and the screen said auto-render done or something like that. Now v1 is sped up and goes black at points. If I uncheck "color balance" and "levels" on v1 it goes back to normal but v1 is washed out again.
Let me know if there is anymore info I can give you.

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[URL=http://s10.photobucket.com/user/mystickid/media/ItisworkingcorrectlyinAE.png.html][IMG]http://i10.photobucket.com/albums/a135/mystickid/ItisworkingcorrectlyinAE.png[/IMG][/URL]
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