Aperture 3 Crashed; Can't relocate Masters despite time machine backup

I recently had a major crash of my OS system 10.6.8. Not sure what happened, but essentially had to rebuild the directory with Diskwarrior. When I tried to open Aperture 3, I received an error message and the inability to open Aperture. After searching through the forums and the internet I essentially reinstalled Aperture 3 with the trial version and updated it to the most recent version. My plugins (Nik Software) are no longer in Aperture as I thought this might have been part of the problem. Nonetheless, I am missing a good deal of my projects from 2011. I get the YELLOW TRIANGLE and the message that the master is not there. So, I have rebuilt the database library (using command-option) and now Aperture is reporting that the images in those projects never existed. NOW, I have fortunately been using time machine to backup regularly. However, when I go back to a recent backup and restore of the Aperture library, those projects are still missing!
I am going insane thinking about this pictures and the missing data. Shouldn't Time Machine saved the all the files prior to the crash? Is there some place/other locations that I should be RESTORING besides the Aperture Library?
I look forward to hearing from you guys and everyone's suggestions, because I am driving myself crazy!

thanks for the reply Frank:
Masters. I do not know. I left it as the default. I assume that means managed?
Error message was the LONG error code with the jist of it being related to what sounds like a PLUGIN error. I don't have the EXACT coding right now as I am not home. I've googled the code +/- other stuff on it and according to discussions here and elsewhere (albeit all archived), it looks like it was related to my plugins.
as far as the restore is concerned, I am POSITIVE that the restored library was the NEW library not the original. But keep in mind, Time Machine only lets me restore the backup to the exact place where the file was before. I am just worried that somehow Time Machine backup hosed my Aperture library somewhere along the way. This is why I was wondering if there is something else I need to restore with my time machine backup besides the library file/database itself?
Thanks for the quick reply.

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Hello,
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Hi there
I need your help! My photos, music, videos, and other data is gone.. Especially the photos i would like to have back, they were stored in my Aperture library (about 13.000 pictures).
For a few days ago my iMac (with Mountain Lion) wouldn't start, just showed the white screen with the 'thinking-circle' - no further… But I wasn't worried , because I had a Time Machine backup. So I restarted, holding down the option key. Then I chose to restore from the backup i had made. It started, but there wasn't going much time before it stopped, said there was an error with the backup.… When it started up again, tried again it said the same. So from there I couldn't boot the iMac, and i couldn't restore it with the Time Machine backup.
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But anyway the partition now was showing with black text, and therefore I could see it in the Finder. And opening it in the Finder showed me one folder: 'Backups.backupdb'. I can open that, and see whats in the folders (it is just VERY slow opening. Can hear the hdd working but it takes so long time to actually see the results.). So i can see the different dates from my backups, open and see whats backuped. And i can look through the folders and find the folder where my Aperture library is stored, and its there! So i copied it and tried to paste it to my other external hdd. But it wouldn't. It showed me the error: 'The Finder can't complete the operation because some data can't be read or written (Error code -36).'
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iMac 27" 3,1 GHz - i5 - 12 GB ram - 1 TB hdd
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Extra boot hdd (with the clean Mountain Lion install) : iomega 250 GB
Macbook Pro 15" - 2,53 GHz core2duo - 4 GB ram - 250 GB hdd
Aperture file size: 163,29 GB
My iTunes library was about 2.000 songs and 100 videos + app's + podcast… (haven't tried copying that yet, only the images because they are my main issue…)
If you have read all this, thank you for that. Hope you see my frustration and hopefully have some ideas of what to do?.. Recover from the original hdd - recover backup hdd - or fix the files / copy them from the corrupted backup somehow? Please help...
From Glenn :-)

If there is any chance of recovery at all your best bet is Prosoft Data Rescue 3 . There is a free trial to see if it can recover what you need. But don't do another process on that drive until you've downloaded and run it.
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Let me first document the steps that did not work and then I will document the steps that worked.
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Try this instead:
Drive Partition and Format
1. Open Disk Utility in your Utilities folder.
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As long as you don't delete the trash, the files should be recoverable.
I suspect using the Put Back command could take a long time, so be patient.
If your Time Machine backups are mixed with your daughter's backups you might want to buy a larger drive and move the Time Machine files to the new drive.
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I don't recommend Western Digital because of the boot problem with some of their drives.
LaCie makes good drives.
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Prices vary but this gives you an idea of what you’ll find. As you notice the second and third TB is usually only $15 more per TB. Normally, you’ll find these prices but right now the 1T is more than the 2T
Seagate Backup Plus 1 TB USB 3.0 $85
Seagate Backup Plus 2 TB USB 3.0 $99
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Aperture 3 Crashed; Can't relocate Masters despite time machine backup

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