Application, once built, shows "Not Responding" in the toolbar, and it doesn't go away

If you have an application that is running with some kind of timeout, (My application will send a message, and wait for a user definable period of time for a reply). If this tine is over 5 seconds, and the user clicks on the application, the app sets its status to "(Not Responding)". This is mirrored on the toolbar.
Once the application begins responding again, the title bar of the app changes back to an active state, although the representation of the app on the tool bar stays in a "(Not Responding)" state.
    I have attempted to stop the user click having an effect by setting the cursor to busy and setting the "Click Disable" to TRUE, but this does not help.
Any ideas how to get round this one? Or is it a bug?
Cheers, Alec

I must not be explaing myself propperly.
Every application that is open has an instance in the task bar
As you can see here, I am running outlook, labview, firefox and MSN, but don't tell my boss
Somtimes, when windows things an application has crashed it will place the phrase "(Not Responding)" next to it's name in the task bar. It will also place the word "(Not Responding)" In the title bar for the application.
I have written a program that calls a .dll. The function of this .dll is to read incomming data up the RS-232 socket of my PC. I can set a timeout on this, lets say I set it to 1 minute.
The application is running, I call the .dll to read incoming data, then I don't produce any incoming data. The application will wait, up to 60 seconds for some data, but in the mean time, Windows thinks the LabVIEW executable file has crashed, so places the word "(Not responding)" in the taskbar AND in the title bar. At this point I send my data up the 232, the data is received and displayed by the application. At this point Windows forgives LabVIEW and the "(Not Responding)" status is revolked. This phrase is then removed from the title bar, but IS NOT removed from the task bar.
Does anyone know if we have control over this, or should I report it as a bug to National Instruments?
Many thanks guys,
Cheers, Alec

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