"Application opened for the first time" warning after every reboot

Hello, I have a problem with Lion 10.7.5. The system does not remember that I already opened applications before. After every reboot, every time I open an application it displays the warning as if it's the first time I'm opening it. Anyone knows how to solve this problem?
Thanks in advance for your help.

In my case, the problem disappeared after I installed the 10.7.5 supplemental update.

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    Regards,
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