Apps don't work after itunes sync and or ipod update!

Today when I clicked on my apps they'd open for a split second and then close down. I did some searching on this forum and as a result deleted all my apps and re-installed them again (time consuming and frustrating as all my game data is gone!) and now they work.
I assume this has to do with me either syncing my ipod with itunes for the 1st time yesterday or downloading an apple update for my ipod touch.
Does anyone know if this is a regular problem (i.e is this going to happen everytime I sync my ipod or update it?) and is there any fix other than me deleting and re-installing my apps?
Thanks!

According to some of the AppleCare advisors that I've spoken with, a reset as you've mentioned can result in data loss.
And according to this article: http://support.apple.com/kb/HT1430 :
"Important: Only reset your iPhone or iPod touch if it is no longer responding."

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