Are anyone else's ID3 tags all jacked up after upgrading to iTunes 11?

I have a large library that I'm downright OCD in managing tag information. All are set at v2.4 and genres, album artist, groups, both track and cd #'s as well as album art have been MANUALLY scrubbed religiously upon import to ensure a manageable library. I've noticed in the past that iTunes does a fairly horrible job in actually changing the ID3 tag info of the AAC or MP3 file itself resulting in horrible tag info when using the files in another system (Chrysler's MyGig system, Microsoft's Sync system, etc.) but iTunes always listed the songs correctly, making my smart playlists, sort and playback very easy and clean. That is until I upgraded to iTunes 11. Apparently they've re-read all the file ID3 tag info as I now have MANY different genres listed and album artist info has disappeared as well as track listing info. Do I need to get an external tag editor and redo all the tag editing I had done previously to now clean this up or have they fixed iTunes to do a better job of actually editing the file info itself?

Get Info on the song within iTunes is how I know the comment field is empty.
I don't have Match or iCloud enabled.
All other tag info is there and left untouched, only the comment field is blank. Tried removing and re-adding the tracks multiple times, but that didn't help.
Reason this annoys me is that I add information to my comment field such as additional genre/style information, band origin or location, related artists, etc. Very helpful stuff for smart playlists.
I can try Stephen Spark's suggestion to convert my ID3 tag version, but I've never, ever had to do that before, so, if iTunes 11 is suddenly only reliably reads one correctly it seems to be a bug with iTunes.

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