Artifacts in Using Save As for AVI to MOV Conversion?

When I SAVE AS a compressed avi file to mov, I am seeing artifacts (they look like interlacing errors) in the final mov file, vs the same frames in the .avi file.  Can I avoid this somehow?  The avi file was compressed with the BlackMagic Intensity code (I think it's motion jpg too).
The file sizes are the same.
Bummer, I bought Quicktime Pro just for this.  Any help appreciated.
Thanks
w

Can anyone here tell me why two duplicate laptops treat the avi-to-mov conversion so differently and why I must export at 480p?
As to QT playback, either the codec component configuration is different on each system or the the AVI file contains a legacy video codec that is turned on for system "A" but left off for system "B" but which is included in the Perian bundle installed on system "B." With reguard to the forced conversion rather than a simple "Save As..." action, please confirm the video codec name given in the "Inspector" window for each system. I suspect that either the video codec is different on each system or that the Perian version of the same codec with a different name may be forcing the "Export" conversion.

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