Audio sync drifting

Log and capture files start out in sync and drift out of sync over the length of the clip. Could dissimilar Sequence, capture and device control presets cause this problem?
Seq Preset is set to DV50 48 Khz which has 16 bit 48 Khz audio
Capture Preset is set to AJA LH 525i29.97 DVCPro 50
Device Preset is set to AJA Kona LH NTSC Sony VTR which has a capture off set of -2 frames and a playback off set of +1 frame.
Audio Playback is set to built in playback with 2 ch of 24 bit 44.1 Khz.
Output to tape is AJA Kona 8 ch 24 bit, 48 Khz.
These dissimilar setting make no sense to me but that is how this system was set before I came into the picture.
Any insight would be greatly appreciated!!!
Thank you in advance for your help!!!
DKG

The editor and switcher/mixer are in different rooms but I could pull the audio into the bay if I have to but I really should be able to do this via SDI embedded.
I suggested this so that we could eliminate the deck and the process of embedding as the culprit. I understand that you don't want this as a permanent solution.
If I capture the same content that drifts from a DVCpro VTR that is fed with the same embedded SDI input everything is groovy.
So, if you record the material to tape and capture everything is good?
K

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    ssake wrote:
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    General
    Complete name                            : D:\Commercials\TORICHMOND\PH6522.mp4
    Format                                   : MPEG-4
    Format profile                           : Base Media / Version 2
    Codec ID                                 : mp42
    File size                                : 3.61 GiB
    Duration                                 : 28mn 30s
    Overall bit rate mode                    : Variable
    Overall bit rate                         : 18.1 Mbps
    Encoded date                             : UTC 2012-11-05 19:56:39
    Tagged date                              : UTC 2012-11-05 19:58:35
    ©TIM                                     : 00:00:00:00
    ©TSC                                     : 30000
    ©TSZ                                     : 1001
    Video
    ID                                       : 1
    Format                                   : AVC
    Format/Info                              : Advanced Video Codec
    Format profile                           : [email protected]
    Format settings, CABAC                   : Yes
    Format settings, ReFrames                : 3 frames
    Codec ID                                 : avc1
    Codec ID/Info                            : Advanced Video Coding
    Duration                                 : 28mn 30s
    Source duration                          : 28mn 30s
    Bit rate mode                            : Constant
    Bit rate                                 : 18.0 Mbps
    Width                                    : 1 920 pixels
    Height                                   : 1 080 pixels
    Display aspect ratio                     : 16:9
    Frame rate mode                          : Variable
    Frame rate                               : 29.970 fps
    Minimum frame rate                       : 29.970 fps
    Maximum frame rate                       : 30.000 fps
    Standard                                 : NTSC
    Color space                              : YUV
    Chroma subsampling                       : 4:2:0
    Bit depth                                : 8 bits
    Scan type                                : Interlaced
    Scan order                               : Top Field First
    Bits/(Pixel*Frame)                       : 0.290
    Stream size                              : 3.57 GiB (99%)
    Source stream size                       : 3.57 GiB (99%)
    Language                                 : English
    Encoded date                             : UTC 2012-11-05 19:56:39
    Tagged date                              : UTC 2012-11-05 19:56:39
    mdhd_Duration                            : 1710709
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    ID                                       : 2
    Format                                   : AAC
    Format/Info                              : Advanced Audio Codec
    Format profile                           : LC
    Codec ID                                 : 40
    Duration                                 : 28mn 30s
    Source duration                          : 28mn 30s
    Bit rate mode                            : Variable
    Bit rate                                 : 192 Kbps
    Maximum bit rate                         : 295 Kbps
    Channel(s)                               : 2 channels
    Channel positions                        : Front: L R
    Sampling rate                            : 48.0 KHz
    Compression mode                         : Lossy
    Stream size                              : 38.6 MiB (1%)
    Source stream size                       : 38.6 MiB (1%)
    Language                                 : English
    Encoded date                             : UTC 2012-11-05 19:56:39
    Tagged date                              : UTC 2012-11-05 19:56:39
    mdhd_Duration                            : 1710763
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    Complete name                            : D:\Commercials\TORICHMOND\PH6522A.m2t
    Format                                   : MPEG-TS
    File size                                : 4.93 GiB
    Duration                                 : 28mn 31s
    Overall bit rate mode                    : Variable
    Overall bit rate                         : 24.7 Mbps
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    ID                                       : 1001 (0x3E9)
    Menu ID                                  : 1 (0x1)
    Format                                   : AVC
    Format/Info                              : Advanced Video Codec
    Format profile                           : [email protected]
    Format settings, CABAC                   : Yes
    Format settings, ReFrames                : 4 frames
    Codec ID                                 : 27
    Duration                                 : 28mn 30s
    Bit rate mode                            : Variable
    Bit rate                                 : 23.4 Mbps
    Maximum bit rate                         : 24.0 Mbps
    Width                                    : 1 920 pixels
    Height                                   : 1 080 pixels
    Display aspect ratio                     : 16:9
    Frame rate                               : 29.970 fps
    Standard                                 : NTSC
    Color space                              : YUV
    Chroma subsampling                       : 4:2:0
    Bit depth                                : 8 bits
    Scan type                                : Interlaced
    Scan order                               : Top Field First
    Bits/(Pixel*Frame)                       : 0.376
    Stream size                              : 4.66 GiB (95%)
    Color primaries                          : BT.709-5, BT.1361, IEC 61966-2-4, SMPTE RP177
    Transfer characteristics                 : BT.709-5, BT.1361
    Matrix coefficients                      : BT.709-5, BT.1361, IEC 61966-2-4 709, SMPTE RP177
    Audio
    ID                                       : 1002 (0x3EA)
    Menu ID                                  : 1 (0x1)
    Format                                   : AC-3
    Format/Info                              : Audio Coding 3
    Mode extension                           : CM (complete main)
    Codec ID                                 : 129
    Duration                                 : 28mn 30s
    Bit rate mode                            : Constant
    Bit rate                                 : 128 Kbps
    Channel(s)                               : 2 channels
    Channel positions                        : Front: L R
    Sampling rate                            : 48.0 KHz
    Bit depth                                : 16 bits
    Compression mode                         : Lossy
    Stream size                              : 26.1 MiB (1%)

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