Automatic filter effect is causing me grief.

Ive used AF many times before, and ive never had this problem up until now.
What it is doing is causing the track it is affecting to fade out half way through the song, then it "pops" back in.
if i stop the song as it starts to fade out, and play again, the effect wont be happening, however later in the song, it will fade out again.
Im using AF to make stutters during a certain part of the track.
The rest of the track is unaffected (minus that mysterious fade out), and plays normally.
anyways, im sorry if that doesnt quite make sense, if you can help of if you need anything clarified please help.

changing settings doesnt do anything
i'd rather not remove the filter, ive got...i dunno what to call it. Theres a drop down bar below where you put the notes, you can control the track volume and pan through it, or whatever else you want, and i got the speed settings fine tuned D=
aaanyways... yeah, ill give that a shot, hopefully my previous info stays.
EDIT::
Looks like duplicating the track and turning the filter off, sliding the bar down a point then back up, and turning the filter back on worked....
Thanks anyways

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