Bizarre issues with Premiere CS5.5 and CS6 (Laggy video and random resizing)

Hey, I've searched all over the internet and no one seems to have the same problem as me. What happens is I will "render entire work area" in CS6 but the video playback is still laggy. I never had this problem in CS5.5, and that was running off a pretty old system. I recently upgraded to an SSD and now have a Core i7 processor with 16GB of RAM. This should not be happening. So as an experiment I put the same footage into CS5.5 and had no lag issues, but now for some reason the videos get resized every time I render. I can get them back to their original size by making them 101%, but then I need to re-render. What can I do to fix these problems?
Adittional info: I have used multiple clips and codecs, always get the same problem.

More information needed for someone to help... please click below and provide the requested information
-Information FAQ http://forums.adobe.com/message/4200840
Also, Report back with the codec details of your file, use the programs below... A screen shot works well to SHOW people what you are doing
http://forums.adobe.com/thread/592070?tstart=30
For PC http://mediainfo.sourceforge.net/en or http://www.headbands.com/gspot/
For Mac http://mediainspector.massanti.com/

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