Can I boot from an external drive with a "Virtual CD"

I just purchased a Hitachi LifeStudio external hard drive for use as my Time Machine backup. When I plugged it in to my MacBook running 10.6.4, I realized that it had one of those "Virtual CDs" that contained the manufacturers crapware, similar to Western Digital's MyWare or whatever its called. It shows up in disk utility as an actual separate disk and not just another partition that can be wiped.
I reformatted the drive using GUID and and created 3 HFS+ Journaled partitions. One was going to be for the 10.6 installer, one for the 10.6 boot, and one for my time machine backup. I restored a 10.6 install dvd disk image I created using disk utility to the 10.6 installer partition (with erase destination checked) then option booted my mac and the partitions did not show up. The only thing I could see was my internal hard drive.
I have done this many times before and it has always worked so Im trying to figure out what Im doing wrong. The only thing I can think of is that the "Virtual CD" that Hitachi put on this external drive is stopping the Mac from seeing the bootable partitions I created. I even went into system preferences>startup disk and blessed the 10.6 install partition. That didn't work either, the computer just booted to my internal drive.
So my questions are. Is it because of this "Virtual CD" that I can't boot from my external drive? If so, is there a way around it? I already searched their web site and emailed their tech support asking for a firmware update to remove the virtual cd.
Thanks in advance.

Yes, it's a known issue. You've already referred to the issue with WD systems. WD has a long list of products that are either not compatible with Macs or won't boot a Mac.
There are practically no problems with bare drives, but once installed in an enclosure there is no guarantee that the package will function as a bootable device. This is especially the case if the manufacturer uses some sort of "virtual" scheme intended for using the device as a sort of one button backup device.
External drives don't have to specifically say anything about being Mac bootable or compatible. It's up to the consumer to verify compatibility and usability.

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