Can't Import Songs To iTunes Using Apple Lossless Encoder

I have about 4,000 songs in FLAC format (which is a lossless format) on my external hard drive. I want to import them into iTunes using the Apple Lossless Encoder. I called Apple support and asked them how to do this, and they told me to go under "Preferences" in iTunes and chose to import using Apple Lossless Encoder.
I did this using Preferences>General>Import Settings, and then went to File>Add Folder to Library, however, it still imported my songs as AAC Audio Files. Does anyone know what I'm doing wrong? Thanks.

iTunes cannot read nor import FLAC files - not without third-party plugins, anyway, and I don't know of any that will allow iTunes to convert a FLAC file to another format - so I'm a bit confused as to the procedure you're following. If all you're doing is using the Add to Library command and choosing the FLAC files, it's quite possible that iTunes is misinterpreting the format and adding what is in reality an invalid link with erroneous format information.
If you have some sort of third-party plugin for FLAC for iTunes, please post that information and perhaps someone here can determine whether iTunes can do a conversion successfully.

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